Emergence and evolution of a prevalent new SARS-CoV-2 variant in the United States

AA Pater, MS Bosmeny, CL Barkau, KN Ovington… - BioRxiv, 2021 - biorxiv.org
Genomic virus surveillance can lead to early identification of new variants and inform proper
response during a pandemic. Using this approach, we have identified a new variant of the …

[HTML][HTML] SARS-CoV-2 variant evolution in the United States: High accumulation of viral mutations over time likely through serial Founder Events and mutational bursts

RN Tasakis, G Samaras, A Jamison, M Lee, A Paulus… - PLoS …, 2021 - journals.plos.org
Since the first case of COVID-19 in December 2019 in Wuhan, China, SARS-CoV-2 has
spread worldwide and within a year and a half has caused 3.56 million deaths globally. With …

SARS-CoV-2 variants of concern in the United States—challenges and opportunities

RP Walensky, HT Walke, AS Fauci - Jama, 2021 - jamanetwork.com
On January 10, 2020, the first genomic sequence of the severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2) isolated from a patient in Wuhan, China, was posted online. As …

Sequence analysis of 20,453 SARS-CoV-2 genomes from the Houston Metropolitan Area identifies the emergence and widespread distribution of multiple isolates of …

SW Long, RJ Olsen, PA Christensen, S Subedi… - MedRxiv, 2021 - medrxiv.org
Since the beginning of the SARS-CoV-2 pandemic, there has been international concern
about the emergence of virus variants with mutations that increase transmissibility, enhance …

[HTML][HTML] Detection and characterization of the SARS-CoV-2 lineage B. 1.526 in New York

AP West Jr, JO Wertheim, JC Wang… - Nature …, 2021 - nature.com
Abstract Wide-scale SARS-CoV-2 genome sequencing is critical to tracking viral evolution
during the ongoing pandemic. We develop the software tool, Variant Database (VDB), for …

[HTML][HTML] SARS-CoV-2 lineage B. 1.526 emerging in the New York region detected by software utility created to query the spike mutational landscape

AP West, CO Barnes, Z Yang, PJ Bjorkman - BioRxiv, 2021 - biorxiv.org
Abstract Wide-scale SARS-CoV-2 genome sequencing is critical to monitoring and
understanding viral evolution during the ongoing pandemic. Variants first detected in the …

A tale of three SARS-CoV-2 variants with independently acquired P681H mutations in New York State

E Lasek-Nesselquist, J Pata, E Schneider, KS George - MedRxiv, 2021 - medrxiv.org
Several SARS-CoV-2 variants of concern have independently acquired some of the same
Spike protein mutations-notably E484K, N501Y, S477N, and K417T-associated with …

[HTML][HTML] Global SARS-CoV-2 genomic surveillance: What we have learned (so far)

S Tosta, K Moreno, G Schuab, V Fonseca… - Infection, Genetics and …, 2023 - Elsevier
The COVID-19 pandemic has brought significant challenges for genomic surveillance
strategies in public health systems worldwide. During the past thirty-four months, many …

Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State

NF Müller, C Wagner, CD Frazar… - Science Translational …, 2021 - science.org
The rapid spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has
gravely affected societies around the world. Outbreaks in different parts of the globe have …

A novel and expanding SARS-CoV-2 variant, B. 1.526, identified in New York

MK Annavajhala, H Mohri, P Wang, M Nair, JE Zucker… - MedRxiv, 2021 - medrxiv.org
Recent months have seen surges of SARS-CoV-2 infection across the globe along with
considerable viral evolution. Extensive mutations in the spike protein of variants B. 1.1. 7 …