The connectome mapper: an open-source processing pipeline to map connectomes with MRI

A Daducci, S Gerhard, A Griffa, A Lemkaddem… - PloS one, 2012 - journals.plos.org
Researchers working in the field of global connectivity analysis using diffusion magnetic
resonance imaging (MRI) can count on a wide selection of software packages for processing …

The connectome viewer toolkit: an open source framework to manage, analyze, and visualize connectomes

S Gerhard, A Daducci, A Lemkaddem… - Frontiers in …, 2011 - frontiersin.org
Advanced neuroinformatics tools are required for methods of connectome mapping,
analysis, and visualization. The inherent multi-modality of connectome datasets poses new …

Mapping the human connectome at multiple scales with diffusion spectrum MRI

L Cammoun, X Gigandet, D Meskaldji, JP Thiran… - Journal of neuroscience …, 2012 - Elsevier
The global structural connectivity of the brain, the human connectome, is now accessible at
millimeter scale with the use of MRI. In this paper, we describe an approach to map the …

Mapping structural connectivity using diffusion MRI: challenges and opportunities

CH Yeh, DK Jones, X Liang… - Journal of Magnetic …, 2021 - Wiley Online Library
Diffusion MRI‐based tractography is the most commonly‐used technique when inferring the
structural brain connectome, ie, the comprehensive map of the connections in the brain. The …

MR connectomics: principles and challenges

P Hagmann, L Cammoun, X Gigandet… - Journal of neuroscience …, 2010 - Elsevier
MR connectomics is an emerging framework in neuro-science that combines diffusion MRI
and whole brain tractography methodologies with the analytical tools of network science. In …

Human cortical connectome reconstruction from diffusion weighted MRI: the effect of tractography algorithm

M Bastiani, NJ Shah, R Goebel, A Roebroeck - Neuroimage, 2012 - Elsevier
Reconstructing the macroscopic human cortical connectome by Diffusion Weighted Imaging
(DWI) is a challenging research topic that has recently gained a lot of attention. In the …

Diffusion MRI-based cortical connectome reconstruction: dependency on tractography procedures and neuroanatomical characteristics

MRT Sinke, WM Otte, D Christiaens, O Schmitt… - Brain Structure and …, 2018 - Springer
Diffusion MRI (dMRI)-based tractography offers unique abilities to map whole-brain
structural connections in human and animal brains. However, dMRI-based tractography …

Building connectomes using diffusion MRI: why, how and but

SN Sotiropoulos, A Zalesky - NMR in Biomedicine, 2019 - Wiley Online Library
Why has diffusion MRI become a principal modality for mapping connectomes in vivo? How
do different image acquisition parameters, fiber tracking algorithms and other …

The seven deadly sins of measuring brain structural connectivity using diffusion MRI streamlines fibre-tracking

F Calamante - Diagnostics, 2019 - mdpi.com
There is great interest in the study of brain structural connectivity, as white matter
abnormalities have been implicated in many disease states. Diffusion magnetic resonance …

[HTML][HTML] Quantitative mapping of the brain's structural connectivity using diffusion MRI tractography: A review

F Zhang, A Daducci, Y He, S Schiavi, C Seguin… - Neuroimage, 2022 - Elsevier
Diffusion magnetic resonance imaging (dMRI) tractography is an advanced imaging
technique that enables in vivo reconstruction of the brain's white matter connections at …