α-Smooth muscle actin expression and desmoplastic stromal reaction in pancreatic cancer: results from the CONKO-001 study
Background: Previous investigations in pancreatic cancer suggest a prognostic role for α-
smooth muscle actin (α-SMA) expression and stromal density in the peritumoural stroma …
smooth muscle actin (α-SMA) expression and stromal density in the peritumoural stroma …
Building a tumor atlas: integrating single-cell RNA-Seq data with spatial transcriptomics in pancreatic ductal adenocarcinoma
To understand the architecture of a tissue it is necessary to know both the cell populations
and their physical relationships to one another. Single-cell RNA-Seq (scRNA-Seq) has …
and their physical relationships to one another. Single-cell RNA-Seq (scRNA-Seq) has …
Spatiotemporal heterogeneity and clinical challenge of pancreatic neuroendocrine tumors
X Lou, Y Qin, X Xu, X Yu, S Ji - … et Biophysica Acta (BBA)-Reviews on …, 2022 - Elsevier
During the course of pancreatic neuroendocrine tumors (NETs), they generally become
more heterogeneous with individual cells exhibiting distinct molecular fingerprints. This …
more heterogeneous with individual cells exhibiting distinct molecular fingerprints. This …
Multimodal spatial transcriptomics uncover distinct tumor microenvironment states and cell-cell communication networks in molecular pancreatic cancer subtypes
The tumor microenvironment (TME) presents a complex ecosystem comprising a diversity of
immune and stromal cell populations that influence tumor progression, drug delivery and …
immune and stromal cell populations that influence tumor progression, drug delivery and …
Comprehensive characterisation of compartment-specific long non-coding RNAs associated with pancreatic ductal adenocarcinoma
Objective Pancreatic ductal adenocarcinoma (PDA) is a highly metastatic disease with
limited therapeutic options. Genome and transcriptome analyses have identified signalling …
limited therapeutic options. Genome and transcriptome analyses have identified signalling …
Integrating single-cell RNA-Seq with spatial transcriptomics in pancreatic ductal adenocarcinoma using multimodal intersection analysis
To understand tissue architecture, it is necessary to understand both which cell types are
present and the physical relationships among them. Single-cell RNA-Seq (scRNA-Seq) has …
present and the physical relationships among them. Single-cell RNA-Seq (scRNA-Seq) has …
Abstract IA16: Reconstructing compartment− specific regulatory programs in pancreatic cancer
Pancreatic cancer is characterized by an expansive, desmoplastic stroma that responds to
neoplastic signals from the malignant epithelium while also instigating a cacophony of …
neoplastic signals from the malignant epithelium while also instigating a cacophony of …
[PDF][PDF] Spatial transcriptomics of FFPE pancreatic intraepithelial neoplasias reveals cellular and molecular alterations of progression to pancreatic ductal carcinoma
AT Bell, JT Mitchell, AL Kiemen, K Fujikura, H Fedor… - Biorxiv, 2022 - scholar.archive.org
Spatial transcriptomics (ST) is a powerful approach for cancers molecular and cellular
characterization. Pancreatic intraepithelial neoplasia (PanIN) is a pancreatic ductal …
characterization. Pancreatic intraepithelial neoplasia (PanIN) is a pancreatic ductal …
Spatial profiling of neuro-immune interactions in gastroenteropancreatic NETs
S Duan, TW Sawyer, BL Witten, H Song, T Else… - bioRxiv, 2023 - biorxiv.org
Gastroenteropancreatic neuroendocrine tumors (GEP-NETs) are heterogeneous
malignancies that arise from complex cellular interactions within the tissue …
malignancies that arise from complex cellular interactions within the tissue …
Integrating microarray-based spatial transcriptomics and single-cell RNA-seq reveals tissue architecture in pancreatic ductal adenocarcinomas
Single-cell RNA sequencing (scRNA-seq) enables the systematic identification of cell
populations in a tissue, but characterizing their spatial organization remains challenging. We …
populations in a tissue, but characterizing their spatial organization remains challenging. We …