Transcriptome/Degradome-Wide Discovery of MicroRNAs and Transcript Targets in Two Paulownia australis Genotypes

S Niu, G Fan, E Xu, M Deng, Z Zhao, Y Dong - PLoS One, 2014 - journals.plos.org
MicroRNAs (miRNAs) are involved in plant growth, development, and response to biotic and
abiotic stresses. Most of the miRNAs that have been identified in model plants are well …

Transcriptome-wide identification and characterization of microRNAs and their Targets in a highly adaptable conifer platycladus orientalis

Y Yang, XG Hu, B Zheng, Y Li, T Wang… - Journal of the …, 2022 - journals.ashs.org
MicroRNAs (miRNAs) are short noncoding RNAs (20–25 nucleotides) that regulate gene
expression posttranscriptionally. However, identification and characterization of miRNAs …

Integrating transcriptomic and metabolomic analysis of hormone pathways in Acer rubrum during developmental leaf senescence

C Zhu, L Xiaoyu, G Junlan, X Yun, R Jie - BMC Plant Biology, 2020 - Springer
Background To fully elucidate the roles and mechanisms of plant hormones in leaf
senescence, we adopted an integrated analysis of both non-senescing and senescing …

Dynamic Responses of Antioxidant and Glyoxalase Systems to Seed Aging Based on Full-Length Transcriptome in Oat (Avena sativa L.)

M Sun, S Sun, C Mao, H Zhang, C Ou, Z Jia, Y Wang… - Antioxidants, 2022 - mdpi.com
Seed aging is a major challenge for food security, agronomic production, and germplasm
conservation, and reactive oxygen species (ROS) and methylglyoxal (MG) are highly …

Full-length transcriptome sequencing reveals the low-temperature-tolerance mechanism of Medicago falcata roots

G Cui, H Chai, H Yin, M Yang, G Hu, M Guo, R Yi… - BMC plant biology, 2019 - Springer
Background Low temperature is one of the main environmental factors that limits crop
growth, development, and production. Medicago falcata is an important leguminous herb …

Genome-wide identification and characterization of lncRNAs in sunflower endosperm

S Yu, Z Zhang, J Li, Y Zhu, Y Yin, X Zhang, Y Dai… - BMC Plant …, 2022 - Springer
Abstract Background Long non-coding RNAs (lncRNAs), as important regulators, play
important roles in plant growth and development. The expression and epigenetic regulation …

Transcriptome approach to address low seed germination in Cyclobalanopsis gilva to save forest ecology

M Zaynab, D Pan, A Noman, M Fatima, S Abbas… - … systematics and ecology, 2018 - Elsevier
Effective ecological restoration of abandoned agricultural fields, especially highly degraded
ecosystems, remains challenge. Germination is imperative to restore natural ecosystems …

Global transcriptome analysis of the maize (Zea mays L.) inbred line 08LF during leaf senescence initiated by pollination-prevention

L Wu, M Li, L Tian, S Wang, L Wu, L Ku, J Zhang… - PLoS …, 2017 - journals.plos.org
In maize (Zea mays), leaf senescence acts as a nutrient recycling process involved in
proteins, lipids, and nucleic acids degradation and transport to the developing sink …

Genome-wide analysis of microRNAs and their target genes related to leaf senescence of rice

X Xu, H Bai, C Liu, E Chen, Q Chen, J Zhuang… - PLoS One, 2014 - journals.plos.org
Grain production of rice (Oryza sativa L.) is a top priority in ensuring food security for human
beings. One of the approaches to increase yield is to delay leaf senescence and to extend …

Molecular traits of long non-protein coding RNAs from diverse plant species show little evidence of phylogenetic relationships

CMA Simopoulos, EA Weretilnyk… - G3: Genes, Genomes …, 2019 - academic.oup.com
Long non-coding RNAs (lncRNAs) represent a diverse class of regulatory loci with roles in
development and stress responses throughout all kingdoms of life. LncRNAs, however …