Whole-organism 3D quantitative characterization of zebrafish melanin by silver deposition micro-CT

SR Katz, MA Yakovlev, DJ Vanselow, Y Ding, AY Lin… - Elife, 2021 - elifesciences.org
We previously described X-ray histotomography, a high-resolution, non-destructive form of X-
ray microtomography (micro-CT) imaging customized for three-dimensional (3D), digital …

Hybrid confocal fluorescence and photoacoustic microscopy for the label-free investigation of melanin accumulation in fish scales

GJ Tserevelakis, M Pavlidis, A Samaras… - Scientific Reports, 2022 - nature.com
Lower vertebrates, including fish, can rapidly alter skin lightness through changes in
melanin concentration and melanosomes' mobility according to various factors, which …

Three-dimensional histology of whole zebrafish by sub-micron synchrotron x-ray micro-tomography

Y Ding, DJ Vanselow, MA Yakovlev, SR Katz, AY Lin… - bioRxiv, 2018 - biorxiv.org
Histological studies providing cellular insights into tissue architecture have been central to
biological discovery and remain clinically invaluable today. Extending histology to three …

Reverse Genetic Approach to Identify Regulators of Pigmentation using Zebrafish

B Sharma, YJ Subramaniam, DA Raja… - JoVE (Journal of …, 2022 - jove.com
Melanocytes are specialized neural crest-derived cells present in the epidermal skin. These
cells synthesize melanin pigment that protects the genome from harmful ultraviolet …

Computational 3D histological phenotyping of whole zebrafish by X-ray histotomography

Y Ding, DJ Vanselow, MA Yakovlev, SR Katz, AY Lin… - Elife, 2019 - elifesciences.org
Organismal phenotypes frequently involve multiple organ systems. Histology is a powerful
way to detect cellular and tissue phenotypes, but is largely descriptive and subjective. To …

Optimizing synchrotron microCT for high-throughput phenotyping of zebrafish

PJ La Rivière, D Clark, A Rojek… - Developments in X …, 2010 - spiedigitallibrary.org
We are creating a state-of-the-art 2D and 3D imaging atlas of zebrafish development. The
atlas employs both 2D histology slides and 3D benchtop and synchrotron micro CT results …

Visualisation of Gene Expression Within the Context of Tissues: an X-Ray Computed Tomography-Based Multimodal Approach

K Kairišs, N Sokolova, L Zilova… - Microscopy and …, 2024 - academic.oup.com
In developmental and cell biology, understanding the spatial distribution of gene activity
offers new insights into developmental processes within an organism and the underlying …

Beyond the whole-mount phenotype: high-resolution imaging in fluorescence-based applications on zebrafish

V Oralová, JT Rosa, M Soenens, JW Bek… - Biology …, 2019 - journals.biologists.com
Zebrafish is now widely used in biomedical research as a model for human diseases, but the
relevance of the model depends on a rigorous analysis of the phenotypes obtained. Many …

Whole-animal imaging, gene function, and the Zebrafish Phenome Project

KC Cheng, X Xin, DP Clark, P La Riviere - Current opinion in genetics & …, 2011 - Elsevier
Imaging can potentially make a major contribution to the Zebrafish Phenome Project, which
will probe the functions of vertebrate genes through the generation and phenotyping of …

[HTML][HTML] Volumetric tracking of migratory melanophores during zebrafish development by optoacoustic microscopy

M Kneipp, H Estrada, A Lauri, J Turner… - Mechanisms of …, 2015 - Elsevier
Unveiling mechanisms driving specification, recruitment and regeneration of melanophores
is key in understanding melanin-related disorders. This study reports on the applicability of a …