Top 50 most wanted fungi
Environmental sequencing regularly recovers fungi that cannot be classified to any
meaningful taxonomic level beyond “Fungi”. There are several examples where evidence of …
meaningful taxonomic level beyond “Fungi”. There are several examples where evidence of …
Formal description of sequence-based voucherless Fungi: promises and pitfalls, and how to resolve them
R Lücking, DL Hawksworth - IMA fungus, 2018 - Springer
There is urgent need for a formal nomenclature of sequence-based, voucherless Fungi,
given that environmental sequencing has accumulated more than one billion fungal ITS …
given that environmental sequencing has accumulated more than one billion fungal ITS …
PHYMYCO-DB: a curated database for analyses of fungal diversity and evolution
S Mahé, M Duhamel, T Le Calvez, L Guillot, L Sarbu… - 2012 - journals.plos.org
Background In environmental sequencing studies, fungi can be identified based on nucleic
acid sequences, using either highly variable sequences as species barcodes or conserved …
acid sequences, using either highly variable sequences as species barcodes or conserved …
Ten reasons why a sequence-based nomenclature is not useful for fungi anytime soon
The large number of species still to be discovered in fungi, together with an exponentially
growing number of environmental sequences that cannot be linked to known taxa, has …
growing number of environmental sequences that cannot be linked to known taxa, has …
Progress in molecular and morphological taxon discovery in Fungi and options for formal classification of environmental sequences
Fungal taxonomy seeks to discover, describe, and classify all species of Fungi and provide
tools for their identification. About 100,000 fungal species have been described so far, but it …
tools for their identification. About 100,000 fungal species have been described so far, but it …
The unbearable lightness of sequenced-based identification
Using the basic GenBank local alignment search tool program (BLAST) to identify fungi
collected in a recently protected beech forest at Montricher (Switzerland), the number of ITS …
collected in a recently protected beech forest at Montricher (Switzerland), the number of ITS …
Current insights into fungal species diversity and perspective on naming the environmental DNA sequences of fungi
The global bio-diversity of fungi has been extensively investigated and their species number
has been estimated. Notably, the development of molecular phylogeny has revealed an …
has been estimated. Notably, the development of molecular phylogeny has revealed an …
Improving ITS sequence data for identification of plant pathogenic fungi
Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial
impacts on natural ecosystems and human endeavours. These taxa often have complex and …
impacts on natural ecosystems and human endeavours. These taxa often have complex and …
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
RH Nilsson, KH Larsson, AFS Taylor… - Nucleic acids …, 2019 - academic.oup.com
Abstract UNITE (https://unite. ut. ee/) is a web-based database and sequence management
environment for the molecular identification of fungi. It targets the formal fungal barcode—the …
environment for the molecular identification of fungi. It targets the formal fungal barcode—the …
MycoCosm portal: gearing up for 1000 fungal genomes
IV Grigoriev, R Nikitin, S Haridas, A Kuo… - Nucleic acids …, 2014 - academic.oup.com
MycoCosm is a fungal genomics portal (http://jgi. doe. gov/fungi), developed by the US
Department of Energy Joint Genome Institute to support integration, analysis and …
Department of Energy Joint Genome Institute to support integration, analysis and …