Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)

G Fan, Y Song, L Yang, X Huang, S Zhang… - …, 2020 - academic.oup.com
Background With more than 30,000 species, fish—including bony, jawless, and
cartilaginous fish—are the largest vertebrate group, and include some of the earliest …

The fishes of Genome 10K

G Bernardi, EO Wiley, H Mansour, MR Miller, G Orti… - Marine Genomics, 2012 - Elsevier
The Genome 10K project aims to sequence the genomes of 10,000 vertebrates,
representing approximately one genome for each vertebrate genus. Since fishes …

The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes

GIGA Community of Scientists - Journal of Heredity, 2014 - academic.oup.com
Over 95% of all metazoan (animal) species comprise the “invertebrates,” but very few
genomes from these organisms have been sequenced. We have, therefore, formed a …

High-quality genome assembly of channel catfish, Ictalurus punctatus

X Chen, L Zhong, C Bian, P Xu, Y Qiu, X You… - …, 2016 - academic.oup.com
Abstract Background The channel catfish (Ictalurus punctatus), a species native to North
America, is one of the most important commercial freshwater fish in the world, especially in …

[HTML][HTML] A compact cartilaginous fish model genome

B Venkatesh, A Tay, N Dandona, JG Patil, S Brenner - Current Biology, 2005 - cell.com
The genomes of several vertebrates, including six mammals, the chicken, Xenopus and four
ray-finned fishes have been sequenced or are currently being sequenced to provide a better …

Chromosomal-level assembly of yellow catfish genome using third-generation DNA sequencing and Hi-C analysis

G Gong, C Dan, S Xiao, W Guo, P Huang, Y Xiong… - …, 2018 - academic.oup.com
Abstract Background The yellow catfish, Pelteobagrus fulvidraco, belonging to the
Siluriformes order, is an economically important freshwater aquaculture fish species in Asia …

Next generation sequencing in aquatic models

Y Lu, Y Shen, W Warren, R Walter - Next Generation Sequencing …, 2016 - books.google.com
The most valuable application of next generation sequencing (NGS) technology is genome
sequencing. Genomes of several aquatic models had been sequenced in the past few years …

[HTML][HTML] Genomes of major fishes in world fisheries and aquaculture: Status, application and perspective

G Lu, M Luo - Aquaculture and Fisheries, 2020 - Elsevier
Capture fisheries and aquaculture provide a significant amount of high-quality protein to
human beings and thus play an essential role in ending global hunger and malnutrition. The …

Improved contiguity of the threespine stickleback genome using long-read sequencing

S Nath, DE Shaw, MA White - G3, 2021 - academic.oup.com
While the cost and time for assembling a genome has drastically decreased, it still remains a
challenge to assemble a highly contiguous genome. These challenges are rapidly being …

De novo genome assembly and annotation of Australia's largest freshwater fish, the Murray cod (Maccullochella peelii), from Illumina and Nanopore …

CM Austin, MH Tan, KA Harrisson, YP Lee… - …, 2017 - academic.oup.com
One of the most iconic Australian fish is the Murray cod, Maccullochella peelii (Mitchell
1838), a freshwater species that can grow to∼ 1.8 metres in length and live to age≥ 48 …