Genome-wide prediction of complex traits in two outcrossing plant species through Deep Learning and Bayesian Regularized Neural Network

C Maldonado, F Mora-Poblete… - Frontiers in Plant …, 2020 - frontiersin.org
Genomic selection models were investigated to predict several complex traits in breeding
populations of Zea mays L. and Eucalyptus globulus Labill. For this, the following methods of …

Evaluation of models for utilization in genomic prediction of agronomic traits in the louisiana sugarcane breeding program

S Satpathy, D Shahi, B Blanchard, M Pontif, K Gravois… - Agriculture, 2022 - mdpi.com
Sugarcane (Saccharum spp.) is an important perennial grass crop for both sugar and biofuel
industries. The Louisiana sugarcane breeding program is focused on improving sugar yield …

Genomic prediction in multi-environment trials in maize using statistical and machine learning methods

CAV Barreto, KO das Graças Dias, IC de Sousa… - Scientific Reports, 2024 - nature.com
In the context of multi-environment trials (MET), genomic prediction is proposed as a tool that
allows the prediction of the phenotype of single cross hybrids that were not tested in field …

Efficient genomic prediction of yield and dry matter in hybrid potato

J Adams, M de Vries, F van Eeuwijk - Plants, 2023 - mdpi.com
There is an ongoing endeavor within the potato breeding sector to rapidly adapt potato from
a clonal polyploid crop to a diploid hybrid potato crop. While hybrid breeding allows for the …

Accurate genomic prediction of Coffea canephora in multiple environments using whole-genome statistical models

LFV Ferrão, RG Ferrão, MAG Ferrão, A Fonseca… - Heredity, 2019 - nature.com
Genomic selection has been proposed as the standard method to predict breeding values in
animal and plant breeding. Although some crops have benefited from this methodology …

[HTML][HTML] Genome-wide association study exposed the pleiotropic genes for yield-related and oil quality traits in Brassica napus L.

Y Xiang, MMU Helal, L Liang, M Zhang, H Han, X Dai… - Oil Crop Science, 2023 - Elsevier
Oilseed rape (Brassica napus L.) is an allotetraploid (AACC, 2n​=​ 38) crop, valued for its
edible oil and protein content. seed yield and nutritional composition of rapeseed are …

Making the most of all data: combining non‐genotyped and genotyped potato individuals with HBLUP

S Sood, Z Lin, B Caruana, AT Slater… - The Plant …, 2020 - Wiley Online Library
Using genomic information to predict phenotypes can improve the accuracy of estimated
breeding values and can potentially increase genetic gain over conventional breeding. In …

Genomic prediction of pumpkin hybrid performance

PY Wu, CW Tung, CY Lee, CT Liao - The plant genome, 2019 - Wiley Online Library
Genomic prediction has become an increasingly popular tool for hybrid performance
evaluation in plant breeding mainly because that it can reduce cost and accelerate a …

SNP-based mixed model association of growth-and yield-related traits in popcorn

GS Mafra, AT Amaral Júnior, JE Almeida Filho… - PLoS …, 2019 - journals.plos.org
The identification of the genes responsible for complex traits is highly promising to
accelerate crop breeding, but such information is still limited for popcorn. Thus, in the …

Harnessing genetic diversity in the USDA pea germplasm collection through genomic prediction

MAA Bari, P Zheng, I Viera, H Worral, S Szwiec… - Frontiers in …, 2021 - frontiersin.org
Phenotypic evaluation and efficient utilization of germplasm collections can be time-
intensive, laborious, and expensive. However, with the plummeting costs of next-generation …