An archaeal histone is required for transformation of Thermococcus kodakarensis

L Čuboňová, M Katano, T Kanai, H Atomi… - Journal of …, 2012 - Am Soc Microbiol
Archaeal histones wrap DNA into complexes, designated archaeal nucleosomes, that
resemble the tetrasome core of a eukaryotic nucleosome. Therefore, all DNA interactions in …

[HTML][HTML] Archaeal nucleosome positioning in vivo and in vitro is directed by primary sequence motifs

N Nalabothula, L Xi, S Bhattacharyya, J Widom… - BMC genomics, 2013 - Springer
Background Histone wrapping of DNA into nucleosomes almost certainly evolved in the
Archaea, and predates Eukaryotes. In Eukaryotes, nucleosome positioning plays a central …

[PDF][PDF] Deep conservation of histone variants in Thermococcales archaea

KM Stevens, A Hocher… - Genome Biology and …, 2022 - academic.oup.com
Histones are ubiquitous in eukaryotes where they assemble into nucleosomes, binding and
wrapping DNA to form chromatin. One process to modify chromatin and regulate DNA …

[HTML][HTML] Extended Archaeal Histone-Based Chromatin Structure Regulates Global Gene Expression in Thermococcus kodakarensis

TJ Sanders, F Ullah, AM Gehring, BW Burkhart… - Frontiers in …, 2021 - frontiersin.org
Histone proteins compact and organize DNA resulting in a dynamic chromatin architecture
impacting DNA accessibility and ultimately gene expression. Eukaryotic chromatin …

The DNA-binding protein HTa from Thermoplasma acidophilum is an archaeal histone analog

A Hocher, M Rojec, JB Swadling, A Esin, T Warnecke - Elife, 2019 - elifesciences.org
Histones are a principal constituent of chromatin in eukaryotes and fundamental to our
understanding of eukaryotic gene regulation. In archaea, histones are widespread but not …

Growth phase‐dependent expression and degradation of histones in the thermophilic archaeon Thermococcus zilligii

ME Dinger, GJ Baillie, DR Musgrave - Molecular microbiology, 2000 - Wiley Online Library
HTz is a member of the archaeal histone family. The archaeal histones have primary
sequences and structural similarity to the eukaryal histone fold domain, and are thought to …

Shuttle Vector Expression in Thermococcus kodakaraensis: Contributions of cis Elements to Protein Synthesis in a Hyperthermophilic Archaeon

TJ Santangelo, L Čuboňová… - Applied and …, 2008 - Am Soc Microbiol
Shuttle vectors that replicate stably and express selectable phenotypes in both
Thermococcus kodakaraensis and Escherichia coli have been constructed. Plasmid pTN1 …

An alternative beads‐on‐a‐string chromatin architecture in Thermococcus kodakarensis

H Maruyama, JC Harwood, KM Moore… - EMBO …, 2013 - embopress.org
We have applied chromatin sequencing technology to the euryarchaeon Thermococcus
kodakarensis, which is known to possess histone‐like proteins. We detect positioned …

Histone and TK0471/TrmBL2 form a novel heterogeneous genome architecture in the hyperthermophilic archaeon Thermococcus kodakarensis

H Maruyama, M Shin, T Oda, R Matsumi… - Molecular biology of …, 2011 - Am Soc Cell Biol
Being distinct from bacteria and eukaryotes, Archaea constitute a third domain of living
things. The DNA replication, transcription, and translation machineries of Archaea are more …

Improved and Versatile Transformation System Allowing Multiple Genetic Manipulations of the Hyperthermophilic Archaeon Thermococcus kodakaraensis

T Sato, T Fukui, H Atomi, T Imanaka - Applied and environmental …, 2005 - Am Soc Microbiol
We have recently developed a gene disruption system for the hyperthermophilic archaeon
Thermococcus kodakaraensis by utilizing a pyrF-deficient mutant, KU25, as a host strain and …