Fungal secretome database: integrated platform for annotation of fungal secretomes

J Choi, J Park, D Kim, K Jung, S Kang, YH Lee - BMC genomics, 2010 - Springer
Background Fungi secrete various proteins that have diverse functions. Prediction of
secretory proteins using only one program is unsatisfactory. To enhance prediction …

FunSecKB: the fungal secretome knowledgebase

G Lum, XJ Min - Database, 2011 - academic.oup.com
Abstract The Fungal Secretome KnowledgeBase (FunSecKB) provides a resource of
secreted fungal proteins, ie secretomes, identified from all available fungal protein data in …

SECRETOOL: integrated secretome analysis tool for fungi

AR Cortázar, AM Aransay, M Alfaro, JA Oguiza… - Amino Acids, 2014 - Springer
The secretome (full set of secreted proteins) has been studied in multiple fungal genomes to
elucidate the potential role of those protein collections involved in a number of metabolic …

[HTML][HTML] Comparative analysis of secretomes from ectomycorrhizal fungi with an emphasis on small-secreted proteins

C Pellegrin, E Morin, FM Martin… - Frontiers in …, 2015 - frontiersin.org
Fungi are major players in the carbon cycle in forest ecosystems due to the wide range of
interactions they have with plants either through soil degradation processes by litter …

EffHunter: A tool for prediction of effector protein candidates in fungal proteomic databases

KG Carreón-Anguiano, I Islas-Flores, J Vega-Arreguín… - Biomolecules, 2020 - mdpi.com
Pathogens are able to deliver small-secreted, cysteine-rich proteins into plant cells to enable
infection. The computational prediction of effector proteins remains one of the most …

[HTML][HTML] Kingdom-wide analysis of fungal small secreted proteins (SSPs) reveals their potential role in host association

KT Kim, J Jeon, J Choi, K Cheong, H Song… - Frontiers in plant …, 2016 - frontiersin.org
Fungal secretome consists of various functional groups of proteins, many of which
participate in nutrient acquisition, self-protection, or manipulation of the environment and …

EffectorP: predicting fungal effector proteins from secretomes using machine learning

J Sperschneider, DM Gardiner, PN Dodds… - New …, 2016 - Wiley Online Library
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell
to facilitate infection. Computational effector candidate identification and subsequent …

[HTML][HTML] Seeking the roles for fungal small-secreted proteins in affecting saprophytic lifestyles

D Feldman, O Yarden, Y Hadar - Frontiers in Microbiology, 2020 - frontiersin.org
Small secreted proteins (SSPs) comprise 40–60% of the total fungal secretome and are
present in fungi of all phylogenetic groups, representing the entire spectrum of lifestyles …

Comparative and transcriptional analysis of the predicted secretome in the lignocellulose‐degrading basidiomycete fungus Pleurotus ostreatus

M Alfaro, R Castanera, JL Lavín… - Environmental …, 2016 - Wiley Online Library
Fungi interact with their environment by secreting proteins to obtain nutrients, elicit
responses and modify their surroundings. Because the set of proteins secreted by a fungus …

Regulation of the fungal secretome

SW McCotter, LC Horianopoulos, JW Kronstad - Current genetics, 2016 - Springer
The ability of countless representatives of the Kingdom Fungi to adapt to and proliferate in
diverse environments is facilitated by regulation of their secretomes to respond to changes …