Enzyme activity engineering based on sequence co-evolution analysis

D Kim, MH Noh, M Park, I Kim, H Ahn, D Ye… - Metabolic …, 2022 - Elsevier
The utility of engineering enzyme activity is expanding with the development of
biotechnology. Conventional methods have limited applicability as they require high …

Improved biocatalysts by directed evolution and rational protein design

UT Bornscheuer, M Pohl - Current opinion in chemical biology, 2001 - Elsevier
The efficient application of biocatalysts requires the availability of suitable enzymes with
high activity and stability under process conditions, desired substrate selectivity and high …

Focused rational iterative site-specific mutagenesis (FRISM): a powerful method for enzyme engineering

Y Bao, Y Xu, X Huang - Molecular Catalysis, 2024 - Elsevier
The FRISM strategy has emerged as one of the most efficient methods for protein
engineering. It involves the identification of hotspots, which is usually rationalized through …

Role of distal sites in enzyme engineering

J Gu, Y Xu, Y Nie - Biotechnology Advances, 2023 - Elsevier
The limitations associated with natural enzyme catalysis have triggered the rise of the field of
protein engineering. Traditional rational design was based on the analysis of protein …

Enzyme engineering: rational redesign versus directed evolution

R Chen - Trends in biotechnology, 2001 - cell.com
Enzyme engineering is undergoing the most profound and exciting transformation in its
history 1. It promises unprecedented expansion in the scope and applications of modified or …

Focused rational iterative site-specific mutagenesis (FRISM)

D Li, Q Wu, MT Reetz - Methods in enzymology, 2020 - Elsevier
Directed evolution has emerged as the most productive enzyme engineering method, with
stereoselectivity playing a crucial role when evolving mutants for application in synthetic …

Catalytic efficiency of designed catalytic proteins

IV Korendovych, WF DeGrado - Current opinion in structural biology, 2014 - Elsevier
Highlights•De novo designed catalysts still are barely matching catalytic efficiency of small
molecules.•Best design strategies focus on the active site functional tuning and protein …

De novo computational enzyme design

A Zanghellini - Current opinion in biotechnology, 2014 - Elsevier
Highlights•The most recent developments of de novo enzyme design (methodologies and
applications) are reported.•The different chemical reactions for which de novo enzymes …

Rational-design engineering to improve enzyme thermostability

V Pongsupasa, P Anuwan, S Maenpuen… - … : Methods and Protocols, 2022 - Springer
The fundamentals of thermostability engineering need to be carried out for proteins with low
thermal stability to expand their utilization. Thus, comprehension of the thermal stability …

Protein engineering approaches in the post-genomic era

RK Singh, JK Lee, C Selvaraj, R Singh… - Current Protein and …, 2018 - ingentaconnect.com
Proteins are one of the most multifaceted macromolecules in living systems. Proteins have
evolved to function under physiological conditions and, therefore, are not usually tolerant of …