[HTML][HTML] Computational approaches for rational design of proteins with novel functionalities

MK Tiwari, R Singh, RK Singh, IW Kim… - Computational and …, 2012 - Elsevier
Proteins are the most multifaceted macromolecules in living systems and have various
important functions, including structural, catalytic, sensory, and regulatory functions. Rational …

Can machine learning revolutionize directed evolution of selective enzymes?

G Li, Y Dong, MT Reetz - Advanced Synthesis & Catalysis, 2019 - Wiley Online Library
Abstract Machine learning as a form of artificial intelligence consists of algorithms and
statistical models for improving computer performance for different tasks. Training data are …

Novel methods for directed evolution of enzymes: quality, not quantity

S Lutz, WM Patrick - Current opinion in biotechnology, 2004 - Elsevier
In the past decade methods of directed molecular evolution have proven revolutionary in
protein engineering. An increasing number of powerful new combinatorial techniques have …

Enzyme engineering for enantioselectivity: from trial-and-error to rational design?

LG Otten, F Hollmann, IWCE Arends - Trends in biotechnology, 2010 - cell.com
The availability of tailored enzymes is crucial for the implementation of biocatalysis in
organic chemistry. Enantioselectivity is one key parameter defining the usefulness of an …

Redesigning enzymes for biocatalysis: exploiting structural understanding for improved selectivity

Y Ding, G Perez-Ortiz, J Peate… - Frontiers in Molecular …, 2022 - frontiersin.org
The discovery of new enzymes, alongside the push to make chemical processes more
sustainable, has resulted in increased industrial interest in the use of biocatalytic processes …

Directed evolution: an approach to engineer enzymes

J Kaur, R Sharma - Critical reviews in biotechnology, 2006 - Taylor & Francis
Directed evolution is being used increasingly in industrial and academic laboratories to
modify and improve commercially important enzymes. Laboratory evolution is thought to …

Enzyme (re) design: lessons from natural evolution and computation

JA Gerlt, PC Babbitt - Current opinion in chemical biology, 2009 - Elsevier
The (re) design of enzymes to catalyze 'new'reactions is a topic of considerable practical and
intellectual interest. Directed evolution (random mutagenesis followed by …

Artificial enzymes bringing together computational design and directed evolution

B de Pina Mariz, S Carvalho, IL Batalha… - Organic & Biomolecular …, 2021 - pubs.rsc.org
Enzymes are proteins that catalyse chemical reactions and, as such, have been widely used
to facilitate a variety of natural and industrial processes, dating back to ancient times. In fact …

Directed evolution of enzyme stability

VGH Eijsink, S Gåseidnes, TV Borchert… - Biomolecular …, 2005 - Elsevier
Modern enzyme development relies to an increasing extent on strategies based on diversity
generation followed by screening for variants with optimised properties. In principle, these …

[引用][C] Discovery of superior enzymes by directed molecular evolution

S Brakmann - Chembiochem, 2001 - Wiley Online Library
Natural selection has created optimal catalysts that exhibit their convincing performance
even with a number of sometimes counteracting constraints. Optimal performance of enzyme …