[HTML][HTML] Genomes of fungi and relatives reveal delayed loss of ancestral gene families and evolution of key fungal traits

Z Merényi, K Krizsán, N Sahu, XB Liu, B Bálint… - Nature Ecology & …, 2023 - nature.com
Fungi are ecologically important heterotrophs that have radiated into most niches on Earth
and fulfil key ecological services. Despite intense interest in their origins, major genomic …

[HTML][HTML] Phylogenetic and ecological reevaluation of the order Onygenales

H Kandemir, K Dukik, M de Melo Teixeira, JB Stielow… - Fungal Diversity, 2022 - Springer
The order Onygenales is classified in the class Eurotiomycetes of the subphylum
Pezizomycotina. Families in this order have classically been isolated from soil and dung …

Species delimitation and evolution in morphologically and chemically diverse communities of the lichen‐forming genus Xanthoparmelia (Parmeliaceae, Ascomycota) …

SD Leavitt, L Johnson… - American Journal of Botany, 2011 - Wiley Online Library
• Premise of the study: Accurate species delimitation is important for understanding the
diversification of biota and has critical implications for ecological and conservation studies …

The ranking of fungi: a tribute to David L. Hawksworth on his 70th birthday

KD Hyde, SSN Maharachchikumbura, S Hongsanan… - Fungal diversity, 2017 - Springer
The history of assigning ranks to fungi, as well as the relative importance of using
divergence time estimates is reviewed. The paper pays tribute to the major mycological …

Towards a natural classification and backbone tree for Sordariomycetes

SSN Maharachchikumbura, KD Hyde, EBG Jones… - Fungal diversity, 2015 - Springer
Sordariomycetes is one of the largest classes of Ascomycota and is characterised by
perithecial ascomata and inoperculate unitunicate asci. The class includes many important …

Fungal molecular evolution: gene trees and geologic time

ML Berbee, JW Taylor - Systematics and evolution, 2001 - Springer
Fungal phylogenetics has always been based on characters, but technological and
intellectual advances are introducing new kinds of characters and new ways of thinking …

The polyphyletic origins of ophiostomatoid fungi

JW Spatafora, M Blackwell - Mycological Research, 1994 - Elsevier
Cladistic analysis was performed on partial sequences from the nuclear-encoded small
subunit ribosomal DNA. Taxa were sampled from Ceratocystis, Ophiostoma and …

Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae …

V Reeb, F Lutzoni, C Roux - Molecular phylogenetics and evolution, 2004 - Elsevier
Despite the recent progress in molecular phylogenetics, many of the deepest relationships
among the main lineages of the largest fungal phylum, Ascomycota, remain unresolved. To …

[HTML][HTML] Novel soil-inhabiting clades fill gaps in the fungal tree of life

L Tedersoo, M Bahram, R Puusepp, RH Nilsson… - Microbiome, 2017 - Springer
Background Fungi are a diverse eukaryotic group of degraders, pathogens, and symbionts,
with many lineages known only from DNA sequences in soil, sediments, air, and water …

Forecasting the number of species of asexually reproducing fungi (Ascomycota and Basidiomycota)

NN Wijayawardene, AJL Phillips, DS Pereira, DQ Dai… - Fungal Diversity, 2022 - Springer
Asexually reproducing fungi play a significant role in essential processes in managed and
wild ecosystems such as nutrients cycling and multitrophic interactions. A large number of …