A single-cell survey of the small intestinal epithelium

AL Haber, M Biton, N Rogel, RH Herbst, K Shekhar… - Nature, 2017 - nature.com
Intestinal epithelial cells absorb nutrients, respond to microbes, function as a barrier and
help to coordinate immune responses. Here we report profiling of 53,193 individual …

[HTML][HTML] Cells of the human intestinal tract mapped across space and time

R Elmentaite, N Kumasaka, K Roberts, A Fleming… - Nature, 2021 - nature.com
The cellular landscape of the human intestinal tract is dynamic throughout life, developing in
utero and changing in response to functional requirements and environmental exposures …

[HTML][HTML] Organization of the human intestine at single-cell resolution

JW Hickey, WR Becker, SA Nevins, A Horning… - Nature, 2023 - nature.com
The intestine is a complex organ that promotes digestion, extracts nutrients, participates in
immune surveillance, maintains critical symbiotic relationships with microbiota and affects …

Enterotypes of the human gut microbiome

M Arumugam, J Raes, E Pelletier, D Le Paslier… - nature, 2011 - nature.com
Our knowledge of species and functional composition of the human gut microbiome is
rapidly increasing, but it is still based on very few cohorts and little is known about variation …

Colonic epithelial cell diversity in health and inflammatory bowel disease

K Parikh, A Antanaviciute, D Fawkner-Corbett… - Nature, 2019 - nature.com
The colonic epithelium facilitates host–microorganism interactions to control mucosal
immunity, coordinate nutrient recycling and form a mucus barrier. Breakdown of the …

Thymus-derived regulatory T cells contribute to tolerance to commensal microbiota

A Cebula, M Seweryn, GA Rempala, SS Pabla… - Nature, 2013 - nature.com
Peripheral mechanisms preventing autoimmunity and maintaining tolerance to commensal
microbiota involve CD4+ Foxp3+ regulatory T (Treg) cells, generated in the thymus or …

Dedicated macrophages organize and maintain the enteric nervous system

MF Viola, M Chavero-Pieres, E Modave, M Delfini… - Nature, 2023 - nature.com
Correct development and maturation of the enteric nervous system (ENS) is critical for
survival. At birth, the ENS is immature and requires considerable refinement to exert its …

[HTML][HTML] Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

J Lloyd-Price, C Arze, AN Ananthakrishnan… - Nature, 2019 - nature.com
Inflammatory bowel diseases, which include Crohn's disease and ulcerative colitis, affect
several million individuals worldwide. Crohn's disease and ulcerative colitis are complex …

Thymic development of gut-microbiota-specific T cells

DF Zegarra-Ruiz, DV Kim, K Norwood, M Kim, WJH Wu… - Nature, 2021 - nature.com
Humans and their microbiota have coevolved a mutually beneficial relationship in which the
human host provides a hospitable environment for the microorganisms and the microbiota …

Single-cell messenger RNA sequencing reveals rare intestinal cell types

D Grün, A Lyubimova, L Kester, K Wiebrands, O Basak… - Nature, 2015 - nature.com
Understanding the development and function of an organ requires the characterization of all
of its cell types. Traditional methods for visualizing and isolating subpopulations of cells are …