Beyond junk-variable tandem repeats as facilitators of rapid evolution of regulatory and coding sequences

R Gemayel, J Cho, S Boeynaems, KJ Verstrepen - Genes, 2012 - mdpi.com
Copy Number Variations (CNVs) and Single Nucleotide Polymorphisms (SNPs) have been
the major focus of most large-scale comparative genomics studies to date. Here, we discuss …

Variable tandem repeats accelerate evolution of coding and regulatory sequences

R Gemayel, MD Vinces, M Legendre… - Annual review of …, 2010 - annualreviews.org
Genotype-to-phenotype mapping commonly focuses on two major classes of mutations:
single nucleotide polymorphisms (SNPs) and copy number variation (CNV). Here, we …

Unstable microsatellite repeats facilitate rapid evolution of coding and regulatory sequences

A Jansen, R Gemayel, KJ Verstrepen - Repetitive DNA, 2012 - karger.com
Tandem repeats are intrinsically highly variable sequences since repeat units are often lost
or gained during replication or following unequal recombination events. Because of their low …

[HTML][HTML] TRPing up the genome: Tandem repeat polymorphisms as dynamic sources of genetic variability in health and disease

AJ Hannan - Discovery medicine, 2010 - discoverymedicine.com
Repetitive DNA sequences constitute a large fraction of the genomes of humans and other
animal species. Tandem repeats are a major class of repetitive DNA and the extent of their …

Natural selection drives the accumulation of amino acid tandem repeats in human proteins

L Mularoni, A Ledda, M Toll-Riera, MM Albà - Genome research, 2010 - genome.cshlp.org
Amino acid tandem repeats are found in a large number of eukaryotic proteins. They are
often encoded by trinucleotide repeats and exhibit high intra-and interspecies size variability …

Evolution of simple sequence repeats as mutable sites

DG King - … polymorphisms: genetic plasticity, neural diversity and …, 2012 - Springer
Because natural selection is commonly presumed to minimize mutation rates, the discovery
of mutationally unstable simple sequence repeats (SSRs) in many functional genomic …

Tandem repeats mediating genetic plasticity in health and disease

AJ Hannan - Nature Reviews Genetics, 2018 - nature.com
Accumulating evidence suggests that many classes of DNA repeats exhibit attributes that
distinguish them from other genetic variants, including the fact that they are more liable to …

On the wrong DNA track: Molecular mechanisms of repeat-mediated genome instability

AN Khristich, SM Mirkin - Journal of Biological Chemistry, 2020 - ASBMB
Expansions of simple tandem repeats are responsible for almost 50 human diseases, the
majority of which are severe, degenerative, and not currently treatable or preventable. In this …

Digital genotyping of macrosatellites and multicopy genes reveals novel biological functions associated with copy number variation of large tandem repeats

M Brahmachary, A Guilmatre, J Quilez, D Hasson… - PLoS …, 2014 - journals.plos.org
Tandem repeats are common in eukaryotic genomes, but due to difficulties in assaying them
remain poorly studied. Here, we demonstrate the utility of Nanostring technology as a …

The biological effects of simple tandem repeats: lessons from the repeat expansion diseases

K Usdin - Genome research, 2008 - genome.cshlp.org
Tandem repeats are common features of both prokaryote and eukaryote genomes, where
they can be found not only in intergenic regions but also in both the noncoding and coding …