[PDF][PDF] Simultaneous use of solution NMR and X-ray data in REFMAC5 for joint refinement/detection of structural differences
The program REFMAC5 from CCP4 was modified to allow the simultaneous use of X-ray
crystallographic data and paramagnetic NMR data (pseudocontact shifts and self-orientation …
crystallographic data and paramagnetic NMR data (pseudocontact shifts and self-orientation …
[PDF][PDF] Overview of refinement procedures within REFMAC5: utilizing data from different sources
O Kovalevskiy, RA Nicholls, F Long… - … Section D: Structural …, 2018 - journals.iucr.org
Refinement is a process that involves bringing into agreement the structural model,
available prior knowledge and experimental data. To achieve this, the refinement procedure …
available prior knowledge and experimental data. To achieve this, the refinement procedure …
[PDF][PDF] REFMAC5 dictionary: organization of prior chemical knowledge and guidelines for its use
AA Vagin, RA Steiner, AA Lebedev… - … Section D: Biological …, 2004 - journals.iucr.org
One of the most important aspects of macromolecular structure refinement is the use of prior
chemical knowledge. Bond lengths, bond angles and other chemical properties are used in …
chemical knowledge. Bond lengths, bond angles and other chemical properties are used in …
How to tackle protein structural data from solution and solid state: an integrated approach
Long-range NMR restraints, such as diamagnetic residual dipolar couplings and
paramagnetic data, can be used to determine 3D structures of macromolecules. They are …
paramagnetic data, can be used to determine 3D structures of macromolecules. They are …
[PDF][PDF] Low-resolution refinement tools in REFMAC5
RA Nicholls, F Long, GN Murshudov - … Crystallographica Section D …, 2012 - journals.iucr.org
Two aspects of low-resolution macromolecular crystal structure analysis are considered:(i)
the use of reference structures and structural units for provision of structural prior information …
the use of reference structures and structural units for provision of structural prior information …
[PDF][PDF] REFMAC5 for the refinement of macromolecular crystal structures
GN Murshudov, P Skubák, AA Lebedev… - … Section D: Biological …, 2011 - journals.iucr.org
This paper describes various components of the macromolecular crystallographic
refinement program REFMAC5, which is distributed as part of the CCP4 suite. REFMAC5 …
refinement program REFMAC5, which is distributed as part of the CCP4 suite. REFMAC5 …
[PDF][PDF] Structure calculation, refinement and validation using CcpNmr Analysis
SP Skinner, BT Goult, RH Fogh… - … Section D: Biological …, 2015 - journals.iucr.org
CcpNmr Analysis provides a streamlined pipeline for both NMR chemical shift assignment
and structure determination of biological macromolecules. In addition, it encompasses tools …
and structure determination of biological macromolecules. In addition, it encompasses tools …
[HTML][HTML] On the complementarity of X-ray and NMR data
X-ray crystallography and NMR contain complementary information for the structural
characterization of biological macromolecules. X-ray diffraction is primarily sensitive to the …
characterization of biological macromolecules. X-ray diffraction is primarily sensitive to the …
Joint X-ray/NMR structure refinement of multidomain/multisubunit systems
Data integration in structural biology has become a paradigm for the characterization of
biomolecular systems, and it is now accepted that combining different techniques can fill the …
biomolecular systems, and it is now accepted that combining different techniques can fill the …
An overview of the CCP4 project in protein crystallography: an example of a collaborative project
MD Winn - Journal of synchrotron radiation, 2003 - journals.iucr.org
The Collaborative Computational Project Number 4 (CCP4) was established in 1979 to
promote collaboration between UK groups writing software for protein crystallography …
promote collaboration between UK groups writing software for protein crystallography …