Prophage loci often remain under-annotated or even unrecognized in prokaryotic genome
sequencing projects. A PHP application, Prophage Finder, has been developed and …

Prophages are phages in lysogeny that are integrated into, and replicated as part of, the
host bacterial genome. These mobile elements can have tremendous impact on their …

Prophinder is a prophage prediction tool coupled with a prediction database, a web server
and web service. Predicted prophages will help to fill the gaps in the current sparse phage …

Abstract PHAge Search Tool (PHAST) is a web server designed to rapidly and accurately
identify, annotate and graphically display prophage sequences within bacterial genomes or …

Identifying active prophages is critical for studying coevolution of phage and bacteria,
investigating phage physiology and biochemistry, and engineering designer phages for …

This study developed a computational tool with a graphical interface and a web-service that
allows the identification of phage regions through homology search and gene clustering. It …

Phigaro is a standalone command-line application that is able to detect prophage regions
taking raw genome and metagenome assemblies as an input. It also produces dynamic …

Background Prophages play a significant role in prokaryotic evolution, often altering the
function of the cell that they infect via transfer of new genes eg, virulence or antibiotic …

Abstract PHAST (PHAge Search Tool) and its successor PHASTER (PHAge Search Tool–
Enhanced Release) have become two of the most widely used web servers for identifying …

Extensive research is currently being conducted on the use of bacteriophages for
applications in human medicine, agriculture and food manufacturing. However, phages are …