[引用][C] A survey of methods for searching the conformational space of small and medium‐sized molecules

AR Leach - Reviews in computational chemistry, 1991 - Wiley Online Library
This chapter contains sections titled: Introduction Systematic Search Methods Model
Building Approaches and Symbolic Representations of Conformation Random Search …

Systematic search in conformational analysis

DD Beusen, EFB Shands, SF Karasek… - Journal of Molecular …, 1996 - Elsevier
The coupling of conformation to activity and reactivity is a widely accepted concept, and as
such has driven the development of tools which execute conformational searches in rapid …

Conformational searching methods for small molecules. I. Study of the sybyl search method

AK Ghose, EP Jaeger, PJ Kowalczyk… - Journal of …, 1993 - Wiley Online Library
Several methods are available in the literature for the conformational analysis of small
molecules. Each of these methods has some advantages and some disadvantages. Also …

An internal-coordinate Monte Carlo method for searching conformational space

G Chang, WC Guida, WC Still - Journal of the American Chemical …, 1989 - ACS Publications
An internal coordinate, random-search method for finding the low-energy conformations of
organic molecules is described. The search is biased toward the low-energy regions of …

Better informed distance geometry: using what we know to improve conformation generation

S Riniker, GA Landrum - Journal of chemical information and …, 2015 - ACS Publications
Small organic molecules are often flexible, ie, they can adopt a variety of low-energy
conformations in solution that exist in equilibrium with each other. Two main search …

Analysis of conformational coverage. 2. Applications of conformational models

A Smellie, SD Kahn, SL Teig - Journal of chemical information and …, 1995 - ACS Publications
It has previously been demonstrated1 that the low-energy conformational spaces of small-to
medium-sized drug molecules can be adequately represented by a small collection of …

Low mode search. An efficient, automated computational method for conformational analysis: application to cyclic and acyclic alkanes and cyclic peptides

I Kolossváry, WC Guida - Journal of the American Chemical …, 1996 - ACS Publications
The location of energy minima on the conformational energy surface of molecules by
computational methods (conformational searching) continues to play a key role in computer …

A new approach to probing conformational space with molecular mechanics: random incremental pulse search

DM Ferguson, DJ Raber - Journal of the American Chemical …, 1989 - ACS Publications
A computational method is described that permits reliable searching for different molecular
conformations. A Monte Carlo type routine is employed to randomly search the potential …

An unbounded systematic search of conformational space

JM Goodman, WC Still - Journal of computational chemistry, 1991 - Wiley Online Library
A new method for searching internal coordinate conformational space systematically via a
continuous‐process procedure is described. Unlike previous systematic search methods …

The multiple minimum problem in molecular modeling. Tree searching internal coordinate conformational space

M Lipton, WC Still - Journal of Computational Chemistry, 1988 - Wiley Online Library
A general algorithm is described which exhaustively searches conformational space using
an internal coordinate tree search. Using only geometrical operations and a set of criteria for …