[HTML][HTML] First Nations Health: The need for linked genomic surveillance of SARS-CoV-2

C Colijn, DJD Earn, J Dushoff, NH Ogden… - Canada …, 2022 - ncbi.nlm.nih.gov
Genomic surveillance during the coronavirus disease 2019 (COVID-19) pandemic has been
key to the timely identification of virus variants with important public health consequences …

[HTML][HTML] Surveillance for variants of SARS-CoV-2 to inform risk assessments

HA Cohen, S Mesfin, J Ikejezie… - Bulletin of the World …, 2023 - ncbi.nlm.nih.gov
Since the beginning of the coronavirus disease 2019 (COVID-19) pandemic, numerous
severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants have emerged …

SARS-CoV-2 in low-income countries: the need for sustained genomic surveillance

AS Gonzalez-Reiche - The Lancet Global Health, 2023 - thelancet.com
The onset of the COVID-19 pandemic accelerated the implementation of genomic
surveillance of its causal agent, SARS-CoV-2, on a global scale. As of April 6, 2023, there …

A method for variant agnostic detection of SARS-CoV-2, rapid monitoring of circulating variants, and early detection of emergent variants such as omicron

E Lai, EB Kennedy, J Lozach… - Journal of Clinical …, 2022 - Am Soc Microbiol
The rapid emergence of SARS-CoV-2 variants raised public health questions concerning
the capability of diagnostic tests to detect new strains, the efficacy of vaccines, and how to …

[HTML][HTML] Global SARS-CoV-2 genomic surveillance: What we have learned (so far)

S Tosta, K Moreno, G Schuab, V Fonseca… - Infection, Genetics and …, 2023 - Elsevier
The COVID-19 pandemic has brought significant challenges for genomic surveillance
strategies in public health systems worldwide. During the past thirty-four months, many …

Sequence analysis of 20,453 SARS-CoV-2 genomes from the Houston Metropolitan Area identifies the emergence and widespread distribution of multiple isolates of …

SW Long, RJ Olsen, PA Christensen, S Subedi… - MedRxiv, 2021 - medrxiv.org
Since the beginning of the SARS-CoV-2 pandemic, there has been international concern
about the emergence of virus variants with mutations that increase transmissibility, enhance …

Identification of SARS-CoV-2 variants using viral sequencing for the Centers for Disease Control and Prevention genomic surveillance program

C Goswami, M Sheldon, C Bixby, M Keddache… - BMC infectious …, 2022 - Springer
Abstract Background The Centers for Disease Control and Prevention contracted with
laboratories to sequence the SARS-CoV-2 genome from positive samples across the United …

Tracking the prevalence and emergence of SARS-CoV-2 variants of concern using a regional genomic surveillance program

A Jung, L Droit, B Febles, C Fronick, L Cook… - Microbiology …, 2024 - Am Soc Microbiol
ABSTRACT SARS-CoV-2 molecular testing coupled with whole-genome sequencing is
instrumental for real-time genomic surveillance. Genomic surveillance is critical for …

Challenges and opportunities for global genomic surveillance strategies in the COVID-19 era

T Ling-Hu, E Rios-Guzman, R Lorenzo-Redondo… - Viruses, 2022 - mdpi.com
Global SARS-CoV-2 genomic surveillance efforts have provided critical data on the ongoing
evolution of the virus to inform best practices in clinical care and public health throughout the …

Rapid and accurate identification of SARS-CoV-2 variants using real time PCR assays

GA Borillo, RM Kagan, EM Marlowe - Frontiers in cellular and …, 2022 - frontiersin.org
Background Genomic surveillance efforts for SARS-CoV-2 are needed to understand the
epidemiology of the COVID-19 pandemic. Viral variants may impact routine diagnostic …