MDSi: Multi-omics Database for Setaria italica

X Li, S Hou, M Feng, R Xia, J Li, S Tang, Y Han, J Gao… - BMC Plant …, 2023 - Springer
Abstract Background Foxtail millet (Setaria italica) harbors the small diploid genome (~ 450
Mb) and shows the high inbreeding rate and close relationship to several major foods, feed …

Integrating omics databases for enhanced crop breeding

H Chao, S Zhang, Y Hu, Q Ni, S Xin, L Zhao… - Journal of Integrative …, 2024 - degruyter.com
Crop plant breeding involves selecting and developing new plant varieties with desirable
traits such as increased yield, improved disease resistance, and enhanced nutritional value …

Proteomics integrated with metabolomics: analysis of the internal causes of nutrient changes in alfalfa at different growth stages

W Fan, G Ge, Y Liu, W Wang, L Liu, Y Jia - BMC plant biology, 2018 - Springer
Abstract Background Alfalfa (Medicago sativa L.) is one of the most important forage
resources in the world due to its high nutritive value. However, its nutritional quality …

Proteomics and metabolomics: two emerging areas for legume improvement

A Ramalingam, H Kudapa, LT Pazhamala… - Frontiers in Plant …, 2015 - frontiersin.org
The crop legumes such as chickpea, common bean, cowpea, peanut, pigeonpea, soybean,
etc. are important sources of nutrition and contribute to a significant amount of biological …

BoGDB: An integrative genomic database for Brassica oleracea L.

Y Wang, J Ji, Z Fang, L Yang, M Zhuang… - Frontiers in Plant …, 2022 - frontiersin.org
Brassica oleracea is an important species due to its high economic and nutritional value.
Moreover, it is an ideal model for studies of morphology and genome evolution. In the …

Sinbase 2.0: An Updated Database to Study Multi-Omics in Sesamum indicum

L Wang, J Yu, Y Zhang, J You, X Zhang, L Wang - Plants, 2021 - mdpi.com
Sesame is one of the oldest oil crops in the world and is widely grown in the tropical and
subtropical areas of Asia, Africa and America. Upon the completion of the sesame reference …

GBS‐based genome‐wide association and genomic selection for alfalfa (Medicago sativa) forage quality improvement

E Biazzi, N Nazzicari, L Pecetti… - The Model Legume …, 2019 - Wiley Online Library
Medicago truncatula has acted as the model species for alfalfa (Medicago sativa L.
complex), which is the most widely grown forage legume worldwide. Improving forage …

Metabolomics intervention towards better understanding of plant traits

V Sharma, P Gupta, P Kagolla, B Hangargi… - Cells, 2021 - mdpi.com
The majority of the most economically important plant and crop species are enriched with
the availability of high-quality reference genome sequences forming the basis of gene …

Omics technology in agriculture: molecular breeding for sustainable crop production

Z Chen, CE Grover, X Ge, X Shangguan - Frontiers in Plant Science, 2023 - frontiersin.org
Omics technologies are high throughput technologies and belong to the concept of systems
biology, which mainly includes genomics, transcriptomics, proteomics, metabolomics …

SoyOmics: a deeply integrated database on soybean multi-omics

Y Liu, Y Zhang, X Liu, Y Shen, D Tian, X Yang, S Liu… - Molecular Plant, 2023 - cell.com
As one of the most important crops to supply the majority of plant oil and protein for the
whole world, soybean is facing an increasing global demand. The reference genome of …