IPOP: an integrative plant multi-omics platform for cross-species comparison and evolutionary study

W Huang, X Hu, Y Ren, M Song, C Ma… - Molecular Biology and …, 2023 - academic.oup.com
The advent of high-throughput sequencing technologies has led to the production of a
significant amount of omics data in plants, which serves as valuable assets for conducting …

Genotype and phenotype data standardization, utilization and integration in the big data era for agricultural sciences

CH Deng, S Naithani, S Kumari, I Cobo-Simón… - Database, 2023 - academic.oup.com
Large-scale genotype and phenotype data have been increasingly generated to identify
genetic markers, understand gene function and evolution and facilitate genomic selection …

[PDF][PDF] The chromosome-level genome sequence of the autotetraploid alfalfa and resequencing of core germplasms provide genomic resources for alfalfa research

C Shen, H Du, Z Chen, H Lu, F Zhu, H Chen, X Meng… - Molecular Plant, 2020 - cell.com
Alfalfa (Medicago sativa) is one of the most important forage crops in the world; however, its
molecular genetics and breeding research are hindered due to the lack of a high-quality …

Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing

X Li, A Acharya, AD Farmer, JA Crow, AK Bharti… - BMC genomics, 2012 - Springer
Background Alfalfa, a perennial, outcrossing species, is a widely planted forage legume
producing highly nutritious biomass. Currently, improvement of cultivated alfalfa mainly …

Genome, Transcriptome, and Germplasm Sequencing Uncovers Functional Variation in the Warm-Season Grain Legume Horsegram Macrotyloma uniflorum (Lam.) …

HB Mahesh, MK Prasannakumar, KG Manasa… - Frontiers in plant …, 2021 - frontiersin.org
Horsegram is a grain legume with excellent nutritional and remedial properties and good
climate resilience, able to adapt to harsh environmental conditions. Here, we used a …

[HTML][HTML] Legume genomics and transcriptomics: From classic breeding to modern technologies

M Afzal, SS Alghamdi, HH Migdadi, MA Khan… - Saudi Journal of …, 2020 - Elsevier
Legumes are essential and play a significant role in maintaining food standards and
augmenting physiochemical soil properties through the biological nitrogen fixation process …

Fab Advances in Fabaceae for Abiotic Stress Resilience: From 'Omics' to Artificial Intelligence

D Singh, P Chaudhary, J Taunk, CK Singh… - International Journal of …, 2021 - mdpi.com
Legumes are a better source of proteins and are richer in diverse micronutrients over the
nutritional profile of widely consumed cereals. However, when exposed to a diverse range of …

[HTML][HTML] MPOD: applications of integrated multi‐omics database for medicinal plants

S He, L Yang, S Ye, Y Lin, X Li, Y Wang… - Plant Biotechnology …, 2022 - ncbi.nlm.nih.gov
Plant natural products (PNPs) have been an important source in human nutrition, industrial
raw materials, medicinal ingredients and half of anticancer drugs are derived from PNPs …

OPTIMAS-DW: a comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize

C Colmsee, M Mascher, T Czauderna, A Hartmann… - BMC Plant …, 2012 - Springer
Background Maize is a major crop plant, grown for human and animal nutrition, as well as a
renewable resource for bioenergy. When looking at the problems of limited fossil fuels, the …

'Omics' Approaches for Crop Improvement

AJ Cortés, MÁ Castillejo, R Yockteng - Agronomy, 2023 - mdpi.com
The growing human population and climate change are imposing unprecedented
challenges on the global food supply [1]. To cope with these pressures, crop improvement …