SoyMD: a platform combining multi-omics data with various tools for soybean research and breeding

Z Yang, C Luo, X Pei, S Wang, Y Huang… - Nucleic Acids …, 2024 - academic.oup.com
Advanced multi-omics technologies offer much information that can uncover the regulatory
mechanisms from genotype to phenotype. In soybean, numerous multi-omics databases …

Applied genetics and genomics in alfalfa breeding

X Li, EC Brummer - Agronomy, 2012 - mdpi.com
Alfalfa (Medicago sativa L.), a perennial and outcrossing species, is a widely planted forage
legume for hay, pasture and silage throughout the world. Currently, alfalfa breeding relies on …

Understanding Omics Driven Plant Improvement and de novo Crop Domestication: Some Examples

R Kumar, V Sharma, S Suresh, DP Ramrao… - Frontiers in …, 2021 - frontiersin.org
In the current era, one of biggest challenges is to shorten the breeding cycle for rapid
generation of a new crop variety having high yield capacity, disease resistance, high nutrient …

De novo sequencing and characterization of seed transcriptome of the tree legume Millettia pinnata for gene discovery and SSR marker development

J Huang, X Guo, X Hao, W Zhang, S Chen, R Huang… - Molecular …, 2016 - Springer
Pongamia (Millettia pinnata) is a promising biofuel crop with multiple merits. Breeding of
ideal Pongamia germplasm for industrial application demands substantial progress in …

[HTML][HTML] ArecaceaeMDB: a comprehensive multi‐omics database for Arecaceae breeding and functional genomics studies

Z Yang, Z Liu, H Xu, Y Li, S Huang, G Cao… - Plant Biotechnology …, 2023 - ncbi.nlm.nih.gov
When tropical plants are mentioned, palm trees first come to mind. Plants in the Arecaceae
are indeed one of the most characteristic plants in the tropics. They are not only important oil …

De novo transcriptome analysis of an imminent biofuel crop, Camelina sativa L. using Illumina GAIIX sequencing platform and identification of SSR markers

S Mudalkar, R Golla, S Ghatty, AR Reddy - Plant molecular biology, 2014 - Springer
Camelina sativa L. is an emerging biofuel crop with potential applications in industry,
medicine, cosmetics and human nutrition. The crop is unexploited owing to very limited …

[PDF][PDF] Omics in agriculture: Applications, challenges and future perspectives

S Shalini, A Singla, M Goyal, V Kaur… - Crop Improvement for …, 2018 - researchgate.net
Omics technologies involving the study of the genome sequences, gene expression profiles,
protein content and metabolites of an organism, are known as genomics, transcriptomics …

The Medicago truncatula gene expression atlas web server

J He, VA Benedito, M Wang, JD Murray, PX Zhao… - BMC …, 2009 - Springer
Abstract Background Legumes (Leguminosae or Fabaceae) play a major role in agriculture.
Transcriptomics studies in the model legume species, Medicago truncatula, are instrumental …

[PDF][PDF] Maize biology: From functional genomics to breeding application

J Yan, BC Tan - Journal of Integrative Plant Biology, 2019 - jipb.net
Maize (Zea mays L.) is one of the most important crops globally for food, feed, and fuel.
Maize grain production has increased more than eight‐fold in the past century to a current …

Omics for the improvement of abiotic, biotic, and agronomic traits in major cereal crops: Applications, challenges, and prospects

B Kaur, KS Sandhu, R Kamal, K Kaur, J Singh… - Plants, 2021 - mdpi.com
Omics technologies, namely genomics, transcriptomics, proteomics, metabolomics, and
phenomics, are becoming an integral part of virtually every commercial cereal crop breeding …