Genomic profiling of collaborative cross founder mice infected with respiratory viruses reveals novel transcripts and infection-related strain-specific gene and isoform …

H Xiong, J Morrison, MT Ferris… - G3: Genes …, 2014 - academic.oup.com
Genetic variation between diverse mouse species is well-characterized, yet existing
knowledge of the mouse transcriptome comes largely from one mouse strain (C57BL/6J). As …

The highest priority: what microbial genomes are telling us about immunity

GH Palmer - Veterinary immunology and immunopathology, 2002 - Elsevier
Study of microbial genomes has provided new insight into the functions that pathogens
require for survival in the animal host. Small genome bacterial pathogens, defined as …

Paradigms of pathogenesis: targeting the mobile genetic elements of disease

EC Keen - Frontiers in cellular and infection microbiology, 2012 - frontiersin.org
A century ago, Gertrude Stein told us that a rose is a rose is a rose, but today, modern
genomics is telling us that a pathogen is not a pathogen. Advances in pathogenomics have …

Making mouse models that reflect human immune responses

L Tao, TA Reese - Trends in immunology, 2017 - cell.com
Humans are infected with a variety of acute and chronic pathogens over the course of their
lives, and pathogen-driven selection has shaped the immune system of humans. The same …

[HTML][HTML] Infectogenomics: insights from the host genome into infectious diseases

P Kellam, RA Weiss - Cell, 2006 - cell.com
Five years into the human postgenomic era, we are gaining considerable knowledge about
host-pathogen interactions through host genomes. This" infectogenomics" approach should …

The key role of genomics in modern vaccine and drug design for emerging infectious diseases

KL Seib, G Dougan, R Rappuoli - PLoS genetics, 2009 - journals.plos.org
It can be argued that the arrival of the “genomics era” has significantly shifted the paradigm
of vaccine and therapeutics development from microbiological to sequence-based …

Heterologous immunity: role in natural and vaccine-induced resistance to infections

B Agrawal - Frontiers in immunology, 2019 - frontiersin.org
The central paradigm of vaccination is to generate resistance to infection by a specific
pathogen when the vacinee is re-exposed to that pathogen. This paradigm is based on two …

Genetic differences in host infectivity affect disease spread and survival in epidemics

O Anacleto, S Cabaleiro, B Villanueva, M Saura… - Scientific reports, 2019 - nature.com
Survival during an epidemic is partly determined by host genetics. While quantitative genetic
studies typically consider survival as an indicator for disease resistance (an individual's …

Genomic, microbial and environmental standardization in animal experimentation limiting immunological discovery

J Enriquez, BMD Mims, S Trasti, KL Furr, MB Grisham - BMC immunology, 2020 - Springer
Background The use of inbred mice housed under standardized environmental conditions
has been critical in identifying immuno-pathological mechanisms in different infectious and …

The capricious nature of bacterial pathogens: phasevarions and vaccine development

A Tan, JM Atack, MP Jennings, KL Seib - Frontiers in Immunology, 2016 - frontiersin.org
Infectious diseases are a leading cause of morbidity and mortality worldwide, and vaccines
are one of the most successful and cost-effective tools for disease prevention. One of the key …