Resolving Phylogenetic Relationships for Streptococcus mitis and Streptococcus oralis through Core- and Pan-Genome Analyses

IM Velsko, MS Perez, VP Richards - Genome biology and …, 2019 - academic.oup.com
Taxonomic and phylogenetic relationships of Streptococcus mitis and Streptococcus oralis
have been difficult to establish biochemically and genetically. We used core-genome …

StreptoBase: An Oral Streptococcus mitis Group Genomic Resource and Analysis Platform

W Zheng, TK Tan, IC Paterson, NVR Mutha, CC Siow… - PloS one, 2016 - journals.plos.org
The oral streptococci are spherical Gram-positive bacteria categorized under the phylum
Firmicutes which are among the most common causative agents of bacterial infective …

Phylogenomic and MALDI-TOF MS Analysis of Streptococcus sinensis HKU4T Reveals a Distinct Phylogenetic Clade in the Genus Streptococcus

JLL Teng, Y Huang, H Tse, JHK Chen… - Genome biology and …, 2014 - academic.oup.com
Streptococcus sinensis is a recently discovered human pathogen isolated from blood
cultures of patients with infective endocarditis. Its phylogenetic position, as well as those of …

Phylogenomics and the Dynamic Genome Evolution of the Genus Streptococcus

VP Richards, SR Palmer… - Genome biology and …, 2014 - academic.oup.com
The genus Streptococcus comprises important pathogens that have a severe impact on
human health and are responsible for substantial economic losses to agriculture. Here, we …

A Pangenome Approach for Discerning Species-Unique Gene Markers for Identifications of Streptococcus pneumoniae and Streptococcus pseudopneumoniae

L Gonzales-Siles, R Karlsson, P Schmidt… - Frontiers in cellular …, 2020 - frontiersin.org
Correct identifications of isolates and strains of the Mitis-Group of the genus Streptococcus
are particularly difficult, due to high genetic similarity, resulting from horizontal gene transfer …

Evolution of the core and pan-genome of Streptococcus: positive selection, recombination, and genome composition

T Lefébure, MJ Stanhope - Genome biology, 2007 - Springer
Abstract Background The genus Streptococcus is one of the most diverse and important
human and agricultural pathogens. This study employs comparative evolutionary analyses …

Gene Repertoire Evolution of Streptococcus pyogenes Inferred from Phylogenomic Analysis with Streptococcus canis and Streptococcus dysgalactiae

T Lefébure, VP Richards, P Lang, P Pavinski-Bitar… - PloS one, 2012 - journals.plos.org
Streptococcus pyogenes, is an important human pathogen classified within the pyogenic
group of streptococci, exclusively adapted to the human host. Our goal was to employ a …

Comparative Genomics of the Bacterial Genus Streptococcus Illuminates Evolutionary Implications of Species Groups

XY Gao, XY Zhi, HW Li, HP Klenk, WJ Li - PloS one, 2014 - journals.plos.org
Members of the genus Streptococcus within the phylum Firmicutes are among the most
diverse and significant zoonotic pathogens. This genus has gone through considerable …

Pangenome analysis and virulence profiling of Streptococcus intermedius

D Sinha, X Sun, M Khare, M Drancourt, D Raoult… - BMC genomics, 2021 - Springer
Background Streptococcus intermedius, a member of the S. anginosus group, is a
commensal bacterium present in the normal microbiota of human mucosal surfaces of the …

Exploring the Genomic Diversity and Cariogenic Differences of Streptococcus mutans Strains Through Pan-Genome and Comparative Genome Analysis

P Meng, C Lu, Q Zhang, J Lin, F Chen - Current microbiology, 2017 - Springer
Pan-genome refers to the sum of genes that can be found in a given bacterial species,
including the core-genome and the dispensable genome. In this study, the genomes from …