A novel Synthetic phenotype association study approach reveals the landscape of association for genomic variants and phenotypes
Abstract Introduction Genome-Wide Association Studies (GWAS) identify tagging variants in
the genome that are statistically associated with the phenotype because of their linkage …
the genome that are statistically associated with the phenotype because of their linkage …
Association mapping in an elite maize breeding population
Association mapping (AM) is a powerful approach to dissect the genetic architecture of
quantitative traits. The main goal of our study was to empirically compare several statistical …
quantitative traits. The main goal of our study was to empirically compare several statistical …
Decoding the genetic basis of ear‐related traits in maize (Zea mays L.) using linkage mapping, association mapping and genomic prediction
L Chang, K He, J Liu - Plant Breeding - Wiley Online Library
As important yield components, the genetic analysis of ear‐related traits could provide a
theoretical basis for maize breeding. Here, we reported the comprehensive genetic …
theoretical basis for maize breeding. Here, we reported the comprehensive genetic …
Capturing pair-wise epistatic effects associated with three agronomic traits in barley
Genetic association mapping has been widely applied to determine genetic markers
favorably associated with a trait of interest and provide information for marker-assisted …
favorably associated with a trait of interest and provide information for marker-assisted …
[PDF][PDF] Detection of quantitative trait loci for ear row number in F
C Yang, J Liu, TZ Rong - Genetics and Molecular Research, 2015 - geneticsmr.com
Ear row number (ERN) is not only a key trait involved in maize (Zea mays L.) evolution but is
also an important component that is directly related to grain yield. In this study, quantitative …
also an important component that is directly related to grain yield. In this study, quantitative …
Association mapping across a multitude of traits collected in diverse environments identifies pleiotropic loci in maize
Classical genetic studies have identified many cases of pleiotropy where mutations in
individual genes alter many different phenotypes. Quantitative genetic studies of natural …
individual genes alter many different phenotypes. Quantitative genetic studies of natural …
Genome-wide association scans (GWAS)
Genome-wide association scans (GWAS) provide a mechanism to assess variation that
segregates in a gene pool, rather than in a biparental population. Fashioned originally in …
segregates in a gene pool, rather than in a biparental population. Fashioned originally in …
Performance of single nucleotide polymorphisms versus haplotypes for genome-wide association analysis in barley
AJ Lorenz, MT Hamblin, JL Jannink - PloS one, 2010 - journals.plos.org
Genome-wide association studies (GWAS) may benefit from utilizing haplotype information
for making marker-phenotype associations. Several rationales for grouping single …
for making marker-phenotype associations. Several rationales for grouping single …
Genome-wide association studies and whole-genome prediction reveal the genetic architecture of KRN in maize
Y An, L Chen, YX Li, C Li, Y Shi, D Zhang, Y Li… - BMC Plant …, 2020 - Springer
Background Kernel row number (KRN) is an important trait for the domestication and
improvement of maize. Exploring the genetic basis of KRN has great research significance …
improvement of maize. Exploring the genetic basis of KRN has great research significance …
A comparison of mainstream genotyping platforms for the evaluation and use of barley genetic resources
We compared the performance of two commonly used genotyping platforms, genotyping-by-
sequencing (GBS) and single nucleotide polymorphism-arrays (SNP), to investigate the …
sequencing (GBS) and single nucleotide polymorphism-arrays (SNP), to investigate the …