Updated and enhanced pig cardiac transcriptome based on long-read RNA sequencing and proteomics
Clinically translatable large animal models have become indispensable for cardiovascular
research, clinically relevant proof of concept studies and for novel therapeutic interventions …
research, clinically relevant proof of concept studies and for novel therapeutic interventions …
[HTML][HTML] Single-nucleus transcriptomics reveal cardiac cell type-specific diversification in metabolic disease transgenic pigs
J Miao, K Zhang, Y Yang, S Xu, J Du, T Wu, C Tao… - Iscience, 2024 - cell.com
Cardiac damage is widely present in patients with metabolic diseases, but the exact
pathophysiological mechanisms involved remain unclear. The porcine heart is an ideal …
pathophysiological mechanisms involved remain unclear. The porcine heart is an ideal …
[HTML][HTML] Perspectives on bulk-tissue RNA sequencing and single-cell RNA sequencing for cardiac transcriptomics
JC Hegenbarth, G Lezzoche, LJ De Windt… - Frontiers in Molecular …, 2022 - frontiersin.org
The heart has been the center of numerous transcriptomic studies in the past decade. Even
though our knowledge of the key organ in our cardiovascular system has significantly …
though our knowledge of the key organ in our cardiovascular system has significantly …
Genome-wide dynamics of nascent noncoding RNA transcription in porcine heart after myocardial infarction
MU Kaikkonen, P Halonen, OHF Liu… - Circulation …, 2017 - Am Heart Assoc
Background—Microarrays and RNA sequencing are widely used to profile transcriptome
remodeling during myocardial ischemia. However, the steady-state RNA analysis lacks in …
remodeling during myocardial ischemia. However, the steady-state RNA analysis lacks in …
[HTML][HTML] Deciphering cell-type-specific gene expression signatures of cardiac diseases through reconstruction of bulk transcriptomes
X Wu, X Zhao, Y Xiong, M Zheng, C Zhong… - Frontiers in cell and …, 2022 - frontiersin.org
Cardiac diseases compose a fatal disease category worldwide. Over the past decade, high-
throughput transcriptome sequencing of bulk heart tissues has widened our understanding …
throughput transcriptome sequencing of bulk heart tissues has widened our understanding …
[HTML][HTML] A high-quality annotated transcriptome of swine peripheral blood
Background High throughput gene expression profiling assays of peripheral blood are
widely used in biomedicine, as well as in animal genetics and physiology research …
widely used in biomedicine, as well as in animal genetics and physiology research …
[HTML][HTML] Single-cell RNA sequencing of murine hearts for studying the development of the cardiac conduction system
H Ren, X Zhou, J Yang, K Kou, T Chen, Z Pu, K Ye… - Scientific Data, 2023 - nature.com
The development of the cardiac conduction system (CCS) is essential for correct heart
function. However, critical details on the cell types populating the CCS in the mammalian …
function. However, critical details on the cell types populating the CCS in the mammalian …
[HTML][HTML] Transcriptional profile of the rat cardiovascular system at single cell resolution
Background: Despite the critical role of the cardiovascular system, our understanding of its
cellular and transcriptional diversity remains limited. We therefore sought to characterize the …
cellular and transcriptional diversity remains limited. We therefore sought to characterize the …
Analysis of transcriptome complexity through RNA sequencing in normal and failing murine hearts
JH Lee, C Gao, G Peng, C Greer, S Ren… - Circulation …, 2011 - Am Heart Assoc
Rationale: Accurate and comprehensive de novo transcriptome profiling in heart is a central
issue to better understand cardiac physiology and diseases. Although significant progress …
issue to better understand cardiac physiology and diseases. Although significant progress …
[HTML][HTML] Cardiac transcriptome profiling of diabetic Akita mice using microarray and next generation sequencing
V Kesherwani, HR Shahshahan, PK Mishra - PloS one, 2017 - journals.plos.org
Although diabetes mellitus (DM) causes cardiomyopathy and exacerbates heart failure, the
underlying molecular mechanisms for diabetic cardiomyopathy/heart failure are poorly …
underlying molecular mechanisms for diabetic cardiomyopathy/heart failure are poorly …