Sequential α‐ketoacid‐hydroxylamine (KAHA) ligations: synthesis of C‐terminal variants of the modifier protein UFM1

AO Ogunkoya, VR Pattabiraman, JW Bode - … Chemie International Edition, 2012 - infona.pl
3 for 3: Sequential α‐ketoacid–hydroxylamine (KAHA) ligations with 5‐oxaproline allow
access to the modifier protein UFM1 (Ubiquitin‐fold modifier 1) with a C‐terminal amide …

Chemical specification of E3 ubiquitin ligase engagement by cysteine-reactive chemistry

RC Sarott, I You, YD Li, ST Toenjes… - Journal of the …, 2023 - ACS Publications
Targeted protein degradation relies on small molecules that induce new protein–protein
interactions between targets and the cellular protein degradation machinery. Most of these …

Chemical synthesis of ubiquitin, ubiquitin‐based probes, and diubiquitin

F El Oualid, R Merkx, R Ekkebus… - Angewandte …, 2010 - Wiley Online Library
Post-translational modification of proteins with ubiquitin (Ub) and Ub chains controls protein
breakdown by the proteasome, cellular localization of proteins, transcriptional activity, and …

Biocompatible lysine protecting groups for the chemoenzymatic synthesis of K48/K63 heterotypic and branched ubiquitin chains

T Mikami, S Majima, H Song, JW Bode - ACS Central Science, 2023 - ACS Publications
The elucidation of emerging biological functions of heterotypic and branched ubiquitin (Ub)
chains requires new strategies for their preparation with defined lengths and connectivity …

Identification and optimization of molecular glue compounds that inhibit a noncovalent E2 enzyme–ubiquitin complex

D St-Cyr, DF Ceccarelli, S Orlicky, AM van der Sloot… - Science …, 2021 - science.org
Pharmacological control of the ubiquitin-proteasome system (UPS) is of intense interest in
drug discovery. Here, we report the development of chemical inhibitors of the ubiquitin …

Backbone 1H, 15N and 13C resonance assignments for an E2 ubiquitin conjugating enzyme-UBE2T

Q Huang, HQ Ng, YY Loh, Z Ke, WH Lim… - Biomolecular NMR …, 2023 - Springer
Ubiquitin-conjugating enzyme E2 T (UBE2T) plays important roles in ubiquitination of
proteins through participation in transferring ubiquitin to its substrate. Due to its importance …

Synthesis of a hydroxyethylene isostere of the tripeptide Arg-Gly-Leu via a convergent acyl-like radical addition strategy

CM Jensen, KB Lindsay, P Andreasen… - The Journal of Organic …, 2005 - ACS Publications
A hydroxyethylene isostere of the tripeptide Arg-Gly-Leu, representing an important fragment
of a novel cyclic-peptide-based uPA inhibitor, was synthesized in few steps employing as …

Purification of E1 and E1-like enzymes

AL Haas - Ubiquitin-Proteasome Protocols, 2005 - Springer
Ubiquitin-activating enzyme is the archetype for a family of enzymes catalyzing the ATP-
coupled activation of ubiquitin and other class 1 ubiquitin-like proteins required for their …

Linkage-specific ubiquitin chain formation depends on a lysine hydrocarbon ruler

J Liwocha, DT Krist… - Nature chemical …, 2021 - nature.com
Virtually all aspects of cell biology are regulated by a ubiquitin code where distinct ubiquitin
chain architectures guide the binding events and itineraries of modified substrates. Various …

Mechanistic insights revealed by a UBE2A mutation linked to intellectual disability

JF de Oliveira, PFV do Prado, SS da Costa… - Nature chemical …, 2019 - nature.com
Abstract Ubiquitin-conjugating enzymes (E2) enable protein ubiquitination by conjugating
ubiquitin to their catalytic cysteine for subsequent transfer to a target lysine side chain …