The analysis of clonal expansions in normal and autoimmune B cell repertoires

U Hershberg, ET Luning Prak - … Transactions of the …, 2015 - royalsocietypublishing.org
… In §5, we comment on clonal expansion, diversity and overlap. Here, we focus … of the
repertoire as a whole (inter-clonal diversity). In §6, we comment on two general metrics of repertoire

T-cell repertoire diversity and clonal expansions in normal and clinical samples

C Pannetier, J Even, P Kourilsky - Immunology today, 1995 - cell.com
… Why is the determination of CDR3 size important in T-cell repertoire analyses? Methods of
T-cell repertoire analysis include random sequencing, RNase protection assays”‘xl’, TCR mini…

Single-cell repertoire analysis demonstrates that clonal expansion is a prominent feature of the B cell response in multiple sclerosis cerebrospinal fluid

GP Owens, AM Ritchie, MP Burgoon… - The Journal of …, 2003 - journals.aai.org
… These L chains were not found in B cells from any other CSF repertoires analyzed in this
study, and MS02-2 clone 1 was the only clonal population in which we detected multiple …

Diversity and clonal selection in the human T-cell repertoire

Q Qi, Y Liu, Y Cheng, J Glanville… - Proceedings of the …, 2014 - National Acad Sciences
… Even though diversity contracts with age, we find that elderly individuals still possess a
diverse T-cell repertoire. However, we observe robust clonal expansion with age in the naïve …

Altered Repertoire Diversity and Disease‐Associated Clonal Expansions Revealed by T Cell Receptor Immunosequencing in Ankylosing Spondylitis Patients

AL Hanson, HJ Nel, L Bradbury, J Phipps… - Arthritis & …, 2020 - Wiley Online Library
… 100 (most expanded) nucleotide clones was calculated per … top 100 clonal expansions in
both the CD4 TCR repertoire (… 11E) and the CD8 TCR repertoire (28.2% in AS patients versus …

The past, present, and future of immune repertoire biology–the rise of next-generation repertoire analysis

A Six, ME Mariotti-Ferrandiz, W Chaara… - Frontiers in …, 2013 - frontiersin.org
… modifications using flow cytometry or Immunoscope provided clear-cut and detailed insight
into the clonal expansion processes during the responses against a defined antigen (64, 66). …

[HTML][HTML] T cell receptor repertoire diversity and clonal expansion in human neonates

RL Schelonka, FM Raaphorst, D Infante, E Kraig… - Pediatric …, 1998 - nature.com
… gestational age, and may contribute substantially to the oligoclonal expansion found in our
study population. We found that clonal expansion appeared equally in the CD4 + and CD8 + …

Age-related modifications of the human alphabeta T cell repertoire due to different clonal expansions in the CD4+ and CD8+ subsets.

A Wack, A Cossarizza, S Heltai, D Barbieri… - International …, 1998 - academic.oup.com
analysis performed in this study shows an age-dependent increase in the number of expanded
clones present in the recirculating T cell pool. Hence, a small number of clones accounts …

[HTML][HTML] T-cell repertoire analysis and metrics of diversity and clonality

J Chiffelle, R Genolet, MAS Perez, G Coukos… - Current opinion in …, 2020 - Elsevier
… in patients with metastatic melanoma treated with immunotherapy drugs, an association
between clonal expansion represented by 1-Pielou’s index and clinical response was …

B cell repertoire diversity and clonal expansion in multiple sclerosis brain lesions

SE Baranzini, MC Jeong, C Butunoi… - The Journal of …, 1999 - journals.aai.org
cloned and sequenced for the detailed analysis of the VDJ junctions. Our results show a
significant perturbation of the B cell repertoire in … corroborates the clonality initially observed by …