The sequence of the repetitive motif influences the frequency of multistep mutations in Short Tandem Repeats
S Antão-Sousa, N Pinto, P Rende, A Amorim… - Scientific Reports, 2023 - nature.com
… with repetitive motif CTTTT (25% of the detected mutations) and the lowest frequency
corresponding to the group with repetitive motifs … between groups with repetitive motifs with …
corresponding to the group with repetitive motifs … between groups with repetitive motifs with …
Sequencing and characterizing short tandem repeats in the human genome
HA Tanudisastro, IW Deveson, H Dashnow… - Nature Reviews …, 2024 - nature.com
… Short tandem repeats (STRs) are highly polymorphic repetitive sequences of short (1–6 bp)
motifs … STR variability can refer to changes in repeat length, motif structure and sequence. …
motifs … STR variability can refer to changes in repeat length, motif structure and sequence. …
[PDF][PDF] DNA recommendations: Further report of the DNA Commission of the ISFH regarding the use of short tandem repeat systems*
W Bär, B Brinkmann, B Budowle… - International Journal of …, 1997 - academia.edu
… It is sometimes possible to define different repetitive motifs, even though the choice of the
strand is clear. In the two following examples, the initial point for reading the repeat motif is …
strand is clear. In the two following examples, the initial point for reading the repeat motif is …
Screening of repetitive motifs inside the genome of the flat oyster (Ostrea edulis): transposable elements and short tandem repeats
… Here, new generation genomic resources were used to analyse the repetitive fraction of the
… short tandem repeats identified in WG were tetranucleotide motifs while trinucleotide motifs …
… short tandem repeats identified in WG were tetranucleotide motifs while trinucleotide motifs …
Evolutionary footprints of short tandem repeats in avian promoters
H Abe, NJ Gemmell - Scientific reports, 2016 - nature.com
… The simplest explanation is that several nucleotide substitutions in repetitive motifs would
precede the slippage dinucleotide mutation particularly between recently diverged groups. …
precede the slippage dinucleotide mutation particularly between recently diverged groups. …
A genomic view of short tandem repeats
M Gymrek - Current opinion in genetics & development, 2017 - Elsevier
… Short tandem repeats (STRs), also known as microsatellites, consist of repeating motifs of
1–6 base pairs (bp) and comprise about 3% of the human genome [1]. Their repetitive nature …
1–6 base pairs (bp) and comprise about 3% of the human genome [1]. Their repetitive nature …
The motif composition of variable number tandem repeats impacts gene expression
… Variable number tandem repeats (VNTRs) are repetitive DNA sequences with the size of
a repeat unit >6 nucleotides. The copy number of a repeat unit is hypervariable owing to its …
a repeat unit >6 nucleotides. The copy number of a repeat unit is hypervariable owing to its …
Sequence composition changes in short tandem repeats: heterogeneity, detection, mechanisms and clinical implications
… Short tandem repeats (STRs) are a class of repetitive elements composed of tandem arrays
of 1–6 base pair sequence motifs 1 … as its genomic context and sequence motif (Table 1). For …
of 1–6 base pair sequence motifs 1 … as its genomic context and sequence motif (Table 1). For …
The effects of transcription and recombination on mutational dynamics of short tandem repeats
M Zavodna, A Bagshaw, R Brauning… - Nucleic acids …, 2018 - academic.oup.com
… Short tandem repeats (STRs), or microsatellites, are DNA sequences, typically less than
100-bp long, in which motifs of 1–6 bp are repeated in tandem. They are abundantly distributed …
100-bp long, in which motifs of 1–6 bp are repeated in tandem. They are abundantly distributed …
Patterns of tandem repetition in plant whole genome assemblies
R Navajas-Pérez, AH Paterson - Molecular Genetics and Genomics, 2009 - Springer
… tandem repeats composed of shorter monomeric units (especially dinucleotide and 9–30-bp
repeats), while higher repetitive … As for the telomeric sequences, we have found the motif (…
repeats), while higher repetitive … As for the telomeric sequences, we have found the motif (…
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