RNA editing with CRISPR-Cas13

DBT Cox, JS Gootenberg, OO Abudayyeh, B Franklin… - Science, 2017 - science.org
… sequence parameters for RNA editing Given that we could achieve precise RNA editing
at a … for programming the system against any RNA target in the transcriptome. Sequence …

Assessing and advancing the safety of CRISPR-Cas tools: from DNA to RNA editing

J Tao, DE Bauer, R Chiarle - Nature Communications, 2023 - nature.com
RNA base editors, focusing on the assessment and improvement of their editing precision
and safety, pushing the limit of editing … of each CRISPR tool from DNA editing to RNA editing, …

Applications of CRISPR/Cas13-based RNA editing in plants

NR Kavuri, M Ramasamy, Y Qi, K Mandadi - Cells, 2022 - mdpi.com
RNA manipulation is advantageous over DNA editing as it prevents unwanted pleiotropic
effects, and RNA … the recent advances in CRISPR/Cas13 systems for RNA editing, focusing on …

Programmable RNA editing with compact CRISPR–Cas13 systems from uncultivated microbes

C Xu, Y Zhou, Q Xiao, B He, G Geng, Z Wang, B Cao… - Nature …, 2021 - nature.com
RNA-seq reads of RNA base-editing experiments were aligned to the hg38 reference
genome with Hisat2 (v.2.0.4) . RNA editing sites were calculated using REDItools 48 with the …

Evaluation of engineered CRISPR-Cas-mediated systems for site-specific RNA editing

RJ Marina, KW Brannan, KD Dong, BA Yee, GW Yeo - Cell reports, 2020 - cell.com
RNA editing, revealing that Cas9 can act as an RNA-aptamer-binding protein. We demonstrate
that Cas9-based A-to-I editing … off-target specificity with Cas13 RNA editing versions. This …

Advances in CRISPR-Cas systems for RNA targeting, tracking and editing

F Wang, L Wang, X Zou, S Duan, Z Li, Z Deng… - Biotechnology …, 2019 - Elsevier
… and Cas13 will promote RNA-targeting technology … in RNA-targeting CRISPR-Cas systems
as well as advances in applications of these systems in RNA targeting, tracking and editing. …

Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors

J Grünewald, R Zhou, SP Garcia, S Iyer, CA Lareau… - Nature, 2019 - nature.com
editing efficiency. Finally, we show that an adenine base editor 7 can also induce
transcriptome-wide RNA edits. … improved variants with reduced RNA editing activities, and suggest …

Insights gained from RNA editing targeted by the CRISPR-Cas13 family

L Liu, DS Pei - International Journal of Molecular Sciences, 2022 - mdpi.com
… This study highlighted the latest progress in RNA editing targeted by the CRISPR-Cas13 family,
and … , and proposed a future vision of RNA editing targeted by the CRISPR-Cas13 family. …

Site-directed RNA editing: recent advances and open challenges

HM Khosravi, MF Jantsch - RNA biology, 2021 - Taylor & Francis
… such as RNA splicing. In contrast to CRISPR-based DNA-editing approaches, RNA editing
events … Moreover, some RNA-based therapeutics are already FDA approved and their use in …

CRISPR-Cas13 inhibitors block RNA editing in bacteria and mammalian cells

P Lin, S Qin, Q Pu, Z Wang, Q Wu, P Gao, J Schettler… - Molecular cell, 2020 - cell.com
RNA editing, nucleic acid detection, and disease diagnosis; however, a constantly active Cas
… Bacteriophage- or prophage-region-encoded anti-CRISPR (acr) gene molecules provide …