Robust demarcation of fourteen different species groups within the genus Streptococcus based on genome-based phylogenies and molecular signatures
… All species groups that were observed in this study are labeled, and the six currently recognized
species groups are denoted with the ‘*’. The two major clades of Streptococcus species …
species groups are denoted with the ‘*’. The two major clades of Streptococcus species …
Limits to robustness and reproducibility in the demarcation of operational taxonomic units
TSB Schmidt, JF Matias Rodrigues… - Environmental …, 2015 - Wiley Online Library
… ie do they group similar sets … robust methods are against slightly changing thresholds and
how reproducible partitions are across methods and thresholds. Finally, we assess robustness …
how reproducible partitions are across methods and thresholds. Finally, we assess robustness …
A framework for delineating biogeographical regions based on species distributions
… Black boundaries within the six coloured regions demarcate the 24 Wallacean … species
level and separately for volant and non-volant species: UPGMA, UPGMC (unweighted pair-group …
level and separately for volant and non-volant species: UPGMA, UPGMC (unweighted pair-group …
Coalescent-based delimitation outperforms distance-based methods for delineating less divergent species: the case of Kurixalus odontotarsus species group
G Yu, D Rao, M Matsui, J Yang - Scientific reports, 2017 - nature.com
… As such, robust measures of species delimitation and boundaries are crucial to understanding
the evolution of organisms and how best to manage biodiversity in the face of increased …
the evolution of organisms and how best to manage biodiversity in the face of increased …
True lemurs… true species-species delimitation using multiple data sources in the brown lemur complex
M Markolf, H Rakotonirina, C Fichtel… - BMC evolutionary …, 2013 - Springer
… information in order to develop robust hypotheses for taxonomic … of newly discovered species
from all vertebrate groups were … cinereiceps from one locality and demarcation of this taxon …
from all vertebrate groups were … cinereiceps from one locality and demarcation of this taxon …
The dynamic discipline of species delimitation: progress toward effectively recognizing species boundaries in natural populations
SD Leavitt, CS Moreau… - Recent Advances in …, 2015 - Springer
… A clear demarcation between intraspecific and interspecific … of species boundaries should
be considered more robust with … species, individual specimen assignment to a species group …
be considered more robust with … species, individual specimen assignment to a species group …
Robustness, reproducibility and ecological consistency in the demarcation of operational taxonomic units from complex sequencing data
TSB Schmidt - 2014 - zora.uzh.ch
… species definitions: they observed that organisms from the same bacterial ‘species’, as …
More recently, João F Matias Rodrigues in our group developed hpc-clust, a fully parallelizable …
More recently, João F Matias Rodrigues in our group developed hpc-clust, a fully parallelizable …
How to fail at species delimitation
… of the putative lineages, it is robust to phylogenetic error in the species tree. However, it is
clear … Six loci were used to delimit lineages in Aliatypus species complex, a group of trapdoor …
clear … Six loci were used to delimit lineages in Aliatypus species complex, a group of trapdoor …
Multilocus phylogeny and species delimitation within the Natterer's bat species complex in the Western Palearctic
… predictor of the phylogenetic relationship between species in this group of bats and is a …
and test the robustness of these clusters. The highlighted clades were then used as ‘species’ in …
and test the robustness of these clusters. The highlighted clades were then used as ‘species’ in …
Cryptic diversity and discordance in single‐locus species delimitation methods within horned lizards (Phrynosomatidae: Phrynosoma)
C Blair, RW Bryson Jr - Molecular Ecology Resources, 2017 - Wiley Online Library
… a robust phylogeny and accurate species assignments for hypothesis testing. Molecular-based
species … sGMYC is expected to work well when there is a clear demarcation in branching …
species … sGMYC is expected to work well when there is a clear demarcation in branching …
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