Comprehensive transcriptome analysis unravels the existence of crucial genes regulating primary metabolism during adventitious root formation in Petunia hybrida

A Ahkami, U Scholz, B Steuernagel, M Strickert… - PLoS …, 2014 - journals.plos.org
… initiation and formation of adventitious roots (AR), a microarray-based transcriptome analysis
in … derived from different stages of AR formation. After exclusion of wound-responsive and …

Transcriptome analysis reveals multiple hormones, wounding and sugar signaling pathways mediate adventitious root formation in apple rootstock

K Li, Y Liang, L Xing, J Mao, Z Liu, F Dong… - International journal of …, 2018 - mdpi.com
… for the regulation of root regeneration is lacking. … formation in apple rootstocks, a transcriptomic
approach was used in the present study to identify genes associated with AR formation

Transcriptome analysis for identifying possible gene regulations during maize root emergence and formation at the initial growth stage

SG Hwang, KH Kim, BM Lee, JC Moon - Genes & genomics, 2018 - Springer
… The root plays an important role during plant development and growth, ie, … root-specific
genes at the initial developmental stages of maize by using network-based transcriptome analysis

Transcriptome analysis of Sesuvium portulacastrum L. uncovers key genes and pathways involved in root formation in response to low-temperature stress

J Yang, S Lin, Y Shen, J Ye, X Jiang, S Li… - Plant Molecular Biology, 2024 - Springer
… Overall, through comprehensive transcriptomic analysis and network assessment under …
and root formation in S. portulacastrum L. Our study thus offers a valuable transcriptomic

A comparative transcriptome analysis leads to new insights into the molecular events governing root formation in mulberry softwood cuttings

W Du, Y Ban, H Nie, Z Tang, X Du, J Cheng - Plant molecular biology …, 2016 - Springer
… type of root formation is available. Here, we compared transcriptome changes during different
root formation … the molecular mechanisms of root formation in mulberry softwood cuttings. …

Transcriptomic analysis reveals ethylene as stimulator and auxin as regulator of adventitious root formation in petunia cuttings

U Druege, P Franken, S Lischewski… - Frontiers in Plant …, 2014 - frontiersin.org
… AR formation from 2 to 192 hours post-excision (hpe) of cuttings, transcriptome analysis by
microarray revealed a change of the character of the rooting zone from SB to root identity. The …

Transcriptome Analysis of Early Lateral Root Formation in Tomato

A Zhang, Q Shang - Plants, 2024 - mdpi.com
… To elucidate gene expression networks during LR formation, we collected samples of … for
transcriptome analysis. In this study, we divided the tomato root system into three equal root

Genome-wide transcriptome analysis of soybean primary root under varying water-deficit conditions

L Song, S Prince, B Valliyodan, T Joshi… - BMC genomics, 2016 - Springer
… elongation and as a negative regulator of adventitious root formation due to modulation
of auxin flux in the root [55–57]. Wang et al. reported that ABA treatment increased soybean …

Transcriptome analysis reveals multiple genes and complex hormonal-mediated interactions with PEG during adventitious root formation in apple

S Li, MM Tahir, T Wu, L Xie, X Zhang, J Mao… - International Journal of …, 2022 - mdpi.com
… We performed a transcriptomic analysis to identify the responses behind the phenotype. A
total of 3204 differentially expressed genes (DEGs) were identified between CK and PEG, with …

Transcriptome analysis of rice root heterosis by RNA-Seq

R Zhai, Y Feng, H Wang, X Zhan, X Shen, W Wu… - BMC genomics, 2013 - Springer
transcriptome dataset was obtained by RNA-Seq, giving a comprehensive overview of the
root transcriptomes at … Using comparative transcriptome analysis, we detected DG HP and …