Transcriptome dynamics of rooting zone and aboveground parts of cuttings during adventitious root formation in Cryptomeria japonica D. Don

Y Fukuda, T Hirao, K Mishima, M Ohira, Y Hiraoka… - BMC plant biology, 2018 - Springer
root formation, little is known of the associated regulatory mechanisms. Whereas adventitious
roots … analyses of transcriptome dynamics during adventitious root formation in whole …

Genome-wide association study and transcriptome analysis reveal key genes affecting root growth dynamics in rapeseed

K Li, J Wang, L Kuang, Z Tian, X Wang, X Dun… - Biotechnology for …, 2021 - Springer
root formation and growth through the division and/or elongation of cells [31]. Recently, the
combination of GWAS, transcriptome … crucial candidate genes regulating root development [9, …

Transcriptome sequencing analysis of maize roots reveals the effects of substrate and root hair formation in a spatial context

M Ganther, D Vetterlein, A Heintz-Buschart, MT Tarkka - Plant and Soil, 2021 - Springer
… and growth in young roots, cell wall formation in developing roots, and oxidative stress in older
… effect of root hair formation, we compared the Zea mays B73 wildtype (WT) to the root hair …

[HTML][HTML] Root system architecture, physiological analysis and dynamic transcriptomics unravel the drought-responsive traits in rice genotypes

P Tiwari, D Srivastava, AS Chauhan, Y Indoliya… - Ecotoxicology and …, 2021 - Elsevier
Transcriptome responses were analyzed in growing root apices to make an extensive
assessment of the response and to draw an integrative picture of molecular responses to drought …

The dynamic transcriptome of pepper (Capsicum annuum) whole roots reveals an important role for the phenylpropanoid biosynthesis pathway in root resistance to …

Y Li, T Yu, T Wu, R Wang, H Wang, HU Du, X Xu, D Xie… - Gene, 2020 - Elsevier
… To uncover the mechanism of root-mediated resistance to P. capsici we elucidated the
dynamic transcriptome of whole pepper roots of the resistant accession CM334 and the …

Transcriptome Dynamics of Rooting Zone and Leaves during In Vitro Adventitious Root Formation in Eucalyptus nitens

PG Ayala, RM Acevedo, CV Luna, M Rivarola, C Acuña… - Plants, 2022 - mdpi.com
… of adventitious root formation, we used a transcriptomic approach in the present study to
identify the genes associated with root formation of in vitro E. nitens shoots during root induction…

Integrated metabolome and transcriptome analyses reveal the molecular mechanism underlying dynamic metabolic processes during taproot development of Panax …

X Li, Y Zhao, S He, J Meng, Y Lu, H Shi, C Liu, B Hao… - BMC Plant …, 2024 - Springer
… Further transcriptome analysis of the data generated in this project revealed that the DEGs
were mainly concentrated on the biosynthetic pathway of lignin, including the biosynthetic …

Transcriptome dynamics revealed by a gene expression atlas of the early Arabidopsis embryo

J Palovaara, S Saiga, JR Wendrich… - Nature Plants, 2017 - nature.com
… , we set out to generate a transcriptome atlas of the early Arabidopsis embryo containing
cell types important for root stem cell niche formation. INTACT relies on profiling of nuclear RNA…

Dynamic transcriptome profiling provides insights into rhizome enlargement in ginger (Zingiber officinale Rosc.)

Y Ren, WB Li, ZX Li, WL Zhang, DW Jue, HT Xing… - PloS one, 2023 - journals.plos.org
… In this study, the transcriptional dynamics at three distinct developmental stages of ginger
rhizomes were monitored. The ‘Zeatin biosynthesis’ GO term was significantly upregulated …

Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration

CW Melnyk, A Gabel, TJ Hardcastle… - Proceedings of the …, 2018 - National Acad Sciences
… overlap with genes expressed during primary root formation, which may be related to the
accumulation of substances activating adventitious root formation, a common response in failed …