Genome-wide identification of lncRNAs, miRNAs, mRNAs and their regulatory networks involved in tapping panel dryness in rubber tree (Hevea brasiliensis)

H Liu, Y Hu, K Yuan, C Feng, Q He, L Sun… - Tree …, 2022 - academic.oup.com
… systematically identify and characterize lncRNAs associated with TPD. In this study, 7763
novel lncRNAs were identified in the barks of rubber tree. A large proportion of lncRNAs were …

[HTML][HTML] Differential expression of lncRNAs and miRNAs between self-rooting juvenile and donor clones unveils novel insight into the molecular regulation of rubber …

HL Li, Y Wang, D Guo, JH Zhu, SQ Peng - Frontiers in Plant Science, 2022 - frontiersin.org
rubber tree protein-encoding genes were removed. A total of 3,657 lncRNAs were identified
from the rubber tree… In this study, several novel lncRNAs were identified in rubber trees. …

Genome-wide identification, characterization, and functional analysis of lncRNAs in Hevea brasiliensis

L Wang, J Wang, H Chen, B Hu - Frontiers in Plant Science, 2022 - frontiersin.org
… , characterization, and functional profile of rubber tree lncRNAs were still in its … , we identified
12,029 lncRNAs from multiple rubber tissues. Following, we found that the rubber lncRNAs

Genome-wide analysis of long noncoding RNAs affecting rubber biosynthesis in Hevea brasiliensis in response to drought stress

Y Niu, C Zheng, Z Liu, H Nan, J Liu - Industrial Crops and Products, 2024 - Elsevier
… To identify lncRNAs in the rubber tree, merged transcripts were processed according to
rigorous criteria. First, the class codes “u, i, j, x, c, e, o” of the transcripts were retained. Second, …

Genome‐wide screening of long non‐coding RNAs involved in rubber biosynthesis in Eucommia ulmoides

H Liu, Y Lu, J Wang, J Hu… - Journal of integrative plant …, 2018 - Wiley Online Library
… we identified differentially expressed lncRNAs and mRNAs that might be involved in Eu-rubber
In the present study, we identified lncRNAs/TUCPs and their regulatory relationships with …

Revealing the dominant long noncoding RNAs responding to the infection with Colletotrichum gloeosporioides in Hevea brasiliensis

H Yin, X Zhang, B Zhang, H Luo, C He - Biology Direct, 2019 - Springer
… in rubber tree, associated with the lncRNAs. Our functional predications of lncRNAs … on
lncRNAs identification and their responsive roles, even if it would affect the expression of …

Construction and analysis of the tapping panel dryness-related lncRNA/circRNA-miRNA-mRNA ceRNA network in latex of Hevea brasiliensis

H Liu, K Yuan, Y Hu, S Wang, Q He, C Feng… - Plant Physiology and …, 2023 - Elsevier
… analyses, 7078 lncRNAs were identified in rubber tree latex. These lncRNAs were categorized
into six … In the present study, we identified 7078 lncRNAs in latex, among which 435 were …

Dissecting microRNA−Target Gene Pairs Involved in Rubber Biosynthesis in Eucommia ulmoides

H Liu, J Hu, H Du, L Wang, J Qing - Forests, 2022 - mdpi.com
… ulmoides, as a hardy rubber tree with wide adaptability, can be … lncRNA–miRNA–mRNA
networks that participate in Eu−rubber biosynthesis based on lncRNAs and genes identified

Transcriptomic and evolutionary analysis of the mechanisms by which P. argentatum, a rubber producing perennial, responds to drought

ADL Nelson, G Ponciano, C McMahan, DC Ilut… - BMC plant biology, 2019 - Springer
… Natural rubber production, which is predominantly sourced from the rubber tree (Hevea
brasiliensis)… Of the 70 guayule putative lncRNAs, we identified a sequence homolog for 14 in the …

Gene expression analysis revealed Hbr-miR396b as a key piece participating in reaction wood formation of Hevea brasiliensis (rubber tree)

X Meng, L Kong, Y Zhang, M Wu, Y Wang, J Li… - Industrial Crops and …, 2022 - Elsevier
… in rubber tree, we used small RNA-seq to explore miRNA regulation in rubber tree reaction
wood … This paper presents a genome-wide identification of miRNAs in rubber tree, their target …