[HTML][HTML] Genetics and genomics of SARS-CoV-2: A review of the literature with the special focus on genetic diversity and SARS-CoV-2 genome detection

A Rahimi, A Mirzazadeh, S Tavakolpour - Genomics, 2021 - Elsevier
… Well-understanding of the SARS-CoV-2 genome is not only essential for … for virus detection.
Accordingly, we reviewed the most critical findings related to the genetics of the SARS-CoV-2

Detection of a SARS-CoV-2 variant of concern in South Africa

H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh… - Nature, 2021 - nature.com
… We retrieved all SARS-CoV-2 genomes from South Africa from the GISAID database as
of the 4 January 2021 (n = 2,882). Before phylogenetic reconstruction, we removed low-quality …

Detection and characterization of the SARS-CoV-2 lineage B. 1.526 in New York

AP West Jr, JO Wertheim, JC Wang… - Nature …, 2021 - nature.com
… The SARS-CoV-2 genomes generated in this study have been deposited in GenBank
under accession codes MZ637509-MZ642234 (see Supplementary Data 1) and GISAID (see …

Detection of viral SARSCoV2 genomes and histopathological changes in endomyocardial biopsies

F Escher, H Pietsch, G Aleshcheva, T Bock… - ESC heart …, 2020 - Wiley Online Library
… Our finding of SARS-CoV-2 genome detection in EMBs of patients suffering from
myocarditis/inflammatory cardiomyopathy cannot rule out or confirm the infection of cardiac cells but …

PfAgo-based detection of SARS-CoV-2

F Wang, J Yang, R He, X Yu, S Chen, Y Liu… - Biosensors and …, 2021 - Elsevier
… On the other hand, nucleic acid detecting method directly identifies … in the SARS-CoV-2
genome and provides the earliest and most sensitive detection of the presence of SARS-CoV-2. …

First detection and genome sequencing of SARSCoV2 in an infected cat in France

C Sailleau, M Dumarest… - Transboundary and …, 2020 - Wiley Online Library
virus could be detected only in faeces. In other natural infections (the two cats in New York for
instance), the virus was detected … cat described in Belgium, the virus was found in the stool …

CRISPR–Cas12-based detection of SARS-CoV-2

JP Broughton, X Deng, G Yu, CL Fasching… - Nature …, 2020 - nature.com
… A positive result requires detection of at least one of the two SARS-CoV-2 viral gene
targets (N gene or E gene, as indicated in the interpretation matrix). QC, quality control. …

[HTML][HTML] Advancements in detection of SARS-CoV-2 infection for confronting COVID-19 pandemics

Y Zhou, L Zhang, YH Xie, J Wu - Laboratory investigation, 2022 - Elsevier
… has already been used as the target to develop an all-in-one dual CRISPR-Cas12a (AIOD-CRISPR)
assay, which was shown to detect 1.3 copies of the SARS-CoV-2 N gene plasmid in …

Rapid electrochemical detection of coronavirus SARS-CoV-2

T Chaibun, J Puenpa, T Ngamdee… - Nature …, 2021 - nature.com
detection of synthetic complementary DNA of SARS-CoV-2 … the rapid detection of the N and
S genes of SARS-CoV-2 from … commonly used gene targets for detection of SARS-CoV-2 are …

[HTML][HTML] First results of a national external quality assessment scheme for the detection of SARS-CoV-2 genome sequences

I Görzer, C Buchta, P Chiba, B Benka, JV Camp… - Journal of Clinical …, 2020 - Elsevier
SARS-CoV-2detection of SARS-CoV-2 based on real-time RT-PCR assays. The objective
of this study was to monitor reliability of the laboratory results for SARS-CoV-2 RNA detection