[HTML][HTML] SARS-CoV-2 human T cell epitopes: Adaptive immune response against COVID-19

A Grifoni, J Sidney, R Vita, B Peters, S Crotty… - Cell host & …, 2021 - cell.com
… between number of epitopes defined and … SARS-CoV-2 human CD4 and CD8 T cell epitope
data compiled from these studies, identifying 1,400 different reported SARS-CoV-2 epitopes

Selective and cross-reactive SARS-CoV-2 T cell epitopes in unexposed humans

J Mateus, A Grifoni, A Tarke, J Sidney, SI Ramirez… - Science, 2020 - science.org
cell epitopes derived from across the genome of SARS-CoV-… + T cells that react to SARS-CoV-2
epitopes actually cross-… these reactive cells are largely canonical memory CD4 + T cells. …

In silico T cell epitope identification for SARS-CoV-2: Progress and perspectives

MS Sohail, SF Ahmed, AA Quadeer… - Advanced drug delivery …, 2021 - Elsevier
… T cell epitopes of SARS-CoV-2, which is largely unknown. Due to the challenges of identifying
epitopes … used for the prediction of SARS-CoV-2 T cell epitopes. These methods employ a …

[HTML][HTML] Bioinformatic prediction of potential T cell epitopes for SARS-Cov-2

K Kiyotani, Y Toyoshima, K Nemoto… - Journal of human …, 2020 - nature.com
epitopes were significantly enriched. By comparing the sequences of these predicted T cell
epitopes to … HLA-class II epitopes that have high homologies to SARS-CoV. To further select …

[HTML][HTML] Machine learning techniques for the prediction of B-cell and T-cell epitopes as potential vaccine targets with a specific focus on SARS-CoV-2 pathogen: A …

SNH Bukhari, A Jain, E Haq, A Mehbodniya, J Webber - Pathogens, 2022 - mdpi.com
… here that the application of epitope prediction tools/methods to SARS-CoV-2 presented in …
for SARS-CoV-2 epitope prediction. Another reason to place special emphasis on SARS-CoV-…

[HTML][HTML] Immunoinformatic analysis of T-and B-cell epitopes for SARS-CoV-2 vaccine design

D Wang, J Mai, W Zhou, W Yu, Y Zhan, N Wang… - Vaccines, 2020 - mdpi.com
… of this epitope in the SARS-CoV-2 S protein. In addition, 62 T-cell epitopes in the SARS-CoV-…
The structure-based immunoinformatic analysis for the SARS-CoV-2 S protein in this study …

[HTML][HTML] T cell epitopes in SARS-CoV-2 proteins are substantially conserved in the Omicron variant

SJ Choi, DU Kim, JY Noh, S Kim, SH Park… - Cellular & molecular …, 2022 - nature.com
… of T cell epitopes identified from the original SARS-CoV-2 … I-restricted CD8 + T cell epitopes
that were previously identified … In the Omicron variant, 88.4% (137/155) of epitopes from the …

[HTML][HTML] Immunoinformatic identification of B cell and T cell epitopes in the SARS-CoV-2 proteome

SN Crooke, IG Ovsyannikova, RB Kennedy… - Scientific reports, 2020 - nature.com
… and humoral immune responses against the target pathogen; therefore, we also sought to
identify potential B cell epitopes from SARS-CoV-2 proteins. We limited our analysis to the …

SARS-CoV-2 genome-wide T cell epitope mapping reveals immunodominance and substantial CD8+ T cell activation in COVID-19 patients

SK Saini, DS Hersby, T Tamhane, HR Povlsen… - Science …, 2021 - science.org
… a T cell phenotype panel, we report a comprehensive list of 122 immunogenic and a subset
of immunodominant SARS-CoV-2 T cell epitopes. Substantial CD8 + T cell recognition was …

[HTML][HTML] Prediction and evolution of B cell epitopes of surface protein in SARS-CoV-2

JR Lon, Y Bai, B Zhong, F Cai, H Du - Virology journal, 2020 - Springer
… (S, E and M protein) of SARS-CoV-2 and predicted the … B cell epitopes, analyzed the
conservation of the epitopes, the … vaccine development and prevention of SARS-CoV-2. However, …