Selection and validation of reliable reference genes in Gossypium raimondii

R Sun, Q He, B Zhang, Q Wang - Biotechnology letters, 2015 - Springer
… Here, we aimed to validate a collection of reference genes in every tissue qRT-PCR studies
in G. raimondii. Our results indicated that UBQ was the worst candidate for normalization in G…

Systematic Comparisons of Positively Selected Genes between Gossypium arboreum and Gossypium raimondii Genomes

Y Guo, Z Peng, J Liu, N Yuan, Z Wang… - Current …, 2019 - ingentaconnect.com
raimondii, we used both the CDS and EST data from NCBI and the cotton genome
website to calculate the number of expressed PSGs [38]. The ratio of expressed PSGs was …

A draft physical map of a D-genome cotton species (Gossypium raimondii)

L Lin, GJ Pierce, JE Bowers, JC Estill, RO Compton… - BMC genomics, 2010 - Springer
raimondii genome is comprised of two qualitatively different … in assembling and validating
a planned reference sequence. … A total of 8064 BACs selected from the ends of the largest …

Characterization, development and exploitation of EST-derived microsatellites in Gossypium raimondii Ulbrich

C Wang, W Guo, C Cai, T Zhang - Chinese Science Bulletin, 2006 - Springer
cotton gene mapping, we selected and characterized functional markers in Gossypium
raimondii… to other molecular markers in terms of practicability and validity. In recent years, a large-…

Simple sequence repeat (SSR) genetic linkage map of D genome diploid cotton derived from an interspecific cross between Gossypium davidsonii and Gossypium …

JN Kirungu, Y Deng, X Cai, RO Magwanga… - International journal of …, 2018 - mdpi.com
… from the D genome of Gossypium raimondii. To date, no … expression in order to validate the
functions annotated from … We selected the top 100 highly up regulated genes in the various …

Breeding for” low-gossypol seed and high-gossypol plants” in upland cotton. Analysis of tri-species hybrids and backcross progenies using AFLPs and mapped …

I Vroh Bi, A Maquet, JP Baudoin, P Du Jardin… - Theoretical and Applied …, 1999 - Springer
raimondii (2D5) as a bridge species, were created. Recurrent selection initiated with these
tri… The introgression of AFLP bands specific to each parent allowed the confirmation of the …

A Whole-Genome DNA Marker Map for Cotton Based on the D-Genome Sequence of Gossypium raimondii L.

Z Wang, D Zhang, X Wang, X Tan, H Guo… - G3: Genes …, 2013 - academic.oup.com
… density of cotton genetic maps is urgent for marker-assisted selection and genomic …
validation of statistically significant associations from genome-wide association studies. The cotton

GraP: platform for functional genomics analysis of Gossypium raimondii

L Zhang, J Guo, Q You, X Yi, Y Ling, W Xu, J Hua… - Database, 2015 - academic.oup.com
… the domains for all proteins, and then selected the candidates for specific gene families based
on … Compared with single gene verification, high-throughput technologies provide large …

[PDF][PDF] Characterization of fruit, seed and fiber of Gossypium raimondii Ulbrich, a wild cotton ecotype

SEL Medina, JM León, CHQ Jara, AEG Rivero… - redalyc.org
raimondii Ulbrich, which have been used since pre-Inca … raimondii known as “wild cotton.”
Plant material from the district … of length and width measurements of cotton fruits, seeds, and …

Genome-Wide Mining, Characterization and Development of Microsatellite Markers in Gossypium Species

Q Wang, L Fang, J Chen, Y Hu, Z Si, S Wang… - Scientific reports, 2015 - nature.com
… -assisted selection is limited. To identify microsatellites for … species by in silico PCR and
validated with 505 markers in G. … raimondii (D 5 ) are regarded as the progenitors that led to …