… RNA sequencing reveals the global molecular responses and ceRNA regulatory network of mRNAs, lncRNAs, miRNAs and circRNAs in response to copper toxicity in …

XZ Fu, XY Zhang, JY Qiu, X Zhou, M Yuan, YZ He… - BMC plant biology, 2019 - Springer
lncRNAs and 1033 novel lncRNAs in XC from the RNAseq data by blasting to known lncRNAs
of … Comparison of the genomic characterizations of the lncRNAs with mRNAs showed that …

Investigating miRNA–lncRNA interactions: computational tools and resources

D Veneziano, GP Marceca, S Di Bella, G Nigita… - … : Methods and Protocols, 2019 - Springer
… of high-throughput sequencing technologies in recent years, … Indeed, not only some lncRNA
genes host miRNA genes … which harbor several miRNA response elements (MREs, ie, …

High-throughput sequencing and co-expression network analysis of lncRNAs and mRNAs in early brain injury following experimental subarachnoid haemorrhage

J Peng, Y Wu, X Tian, J Pang, L Kuai, F Cao, X Qin… - Scientific reports, 2017 - nature.com
… have been shown to be involved in inflammatory responses 21,22 , were also … sequencing
techniques, studies targeting the roles of lncRNAs in inflammation and the immune response

lncRNAs regulate the innate immune response to viral infection

J Ouyang, J Hu, JL Chen - Wiley Interdisciplinary Reviews …, 2016 - Wiley Online Library
sequencing (NGS) and cDNA library analysis, the first discovery of lncRNA expression in
response … 997 nonannotated mouse lncRNAs.49 In vivo and in vitro studies of a subset of these …

Role of next-generation RNA-seq data in discovery and characterization of long non-coding RNA in plants

S Tyagi, A Sharma, SK Upadhyay - Next Generation Plant …, 2018 - books.google.com
… The next-generation sequencing (NGS) technologies embrace advance sequencing technologies
that … The exploration of lncRNAs in various plant species in response to different stress …

[HTML][HTML] Whole-transcriptome RNA sequencing reveals the global molecular responses and circRNA/lncRNA-miRNA-mRNA ceRNA regulatory network in chicken fat …

C Xiao, T Sun, Z Yang, L Zou, J Deng, X Yang - Poultry Science, 2022 - Elsevier
… The transcripts were also used to blast the lncRNA sequences in the protein families (Pfam) …
The lncRNAs genomic sequences were translated into protein sequences by the EMBOSS …

Identification of maize long non-coding RNAs responsive to drought stress

W Zhang, Z Han, Q Guo, Y Liu, Y Zheng, F Wu, W Jin - PloS one, 2014 - journals.plos.org
… have been identified using the full-length cDNA sequences of maize, and these lncRNAs
may … Numerous lncRNAs have been reported to participate in responses to a wide variety of …

… and characterization of long non-coding RNAs involved in osmotic and salt stress in Medicago truncatula using genome-wide high-throughput sequencing

TZ Wang, M Liu, MG Zhao, R Chen, WH Zhang - BMC plant biology, 2015 - Springer
LncRNAs are likely involved in regulating plant’s responses and adaptation to osmotic and
lncRNAs in responses of plants in general and M. truncatula in particular to abiotic stresses. …

Strand-specific RNA-seq based identification and functional prediction of drought-responsive lncRNAs in cassava

Z Ding, W Tie, L Fu, Y Yan, G Liu, W Yan, Y Li, C Wu… - BMC genomics, 2019 - Springer
… With the rapid development of high-throughput sequencing technologies, numerous lncRNAs
… These findings will expand our knowledge of lncRNAs participating drought response in …

Research on lncRNA related to drought resistance of Shanlan upland rice

X Yang, C Liu, X Niu, L Wang, L Li, Q Yuan, X Pei - BMC genomics, 2022 - Springer
… of lncRNA in Shanlan upland rice in response to drought stress. Through strand-specific
transcriptome sequencing and small RNA sequencing, a series of drought-related …