Integrated lncRNA function upon genomic and epigenomic regulation
… myriad lncRNAs with diverse sequences, structures, and functions. The advent of high-throughput
and sensitive technologies has further uncovered the vast heterogeneity of lncRNA-…
and sensitive technologies has further uncovered the vast heterogeneity of lncRNA-…
RNA sequencing of CD4 T-cells reveals the relationships between lncRNA-mRNA co-expression in elite controller vs. HIV-positive infected patients
C Chen, X Lu, N Wu - PeerJ, 2020 - peerj.com
… of DE lncRNAs targeting DE mRNAs were found and several interesting interactions were
identified as being associated with viral infections and immune responses within the networks …
identified as being associated with viral infections and immune responses within the networks …
[HTML][HTML] Classification and experimental identification of plant long non-coding RNAs
… We also highlight a subset of lncRNAs that are epigenetic … lncRNAs slylnc0195 and 1077
are up-regulated in response to … CANTATdb contain sequences of putative lncRNAs present in …
are up-regulated in response to … CANTATdb contain sequences of putative lncRNAs present in …
Genome-wide identification and functional prediction of cold and/or drought-responsive lncRNAs in cassava
S Li, X Yu, N Lei, Z Cheng, P Zhao, Y He, W Wang… - Scientific reports, 2017 - nature.com
… -sequencing (RNA-seq) data, thousands of lncRNAs have … lncRNAs response to cold and/or
drought stress, and enhanced our understanding of putative regulatory functions of lncRNAs …
drought stress, and enhanced our understanding of putative regulatory functions of lncRNAs …
Identification and functional analysis of long non-coding RNA (lncRNA) in response to seed aging in rice
Y Zhang, F Fan, Q Zhang, Y Luo, Q Liu, J Gao, J Liu… - Plants, 2022 - mdpi.com
… RNA sequencing of samples from rice embryos, analyzed the differences in expression of
rice seed lncRNAs … 6002 rice lncRNAs. During the AAT period, the expression levels of most …
rice seed lncRNAs … 6002 rice lncRNAs. During the AAT period, the expression levels of most …
Genome-Wide Identification and Functional Prediction of Novel Drought-Responsive lncRNAs in Pyrus betulifolia
… The genome of the pear (Pyrus bretschneideri Rehd.) has been sequenced recently [1],
but no systematic identification of lncRNAs and their responses to drought stress has been …
but no systematic identification of lncRNAs and their responses to drought stress has been …
The long non-coding RNA LUCAT1 is a negative feedback regulator of interferon responses in humans
S Agarwal, T Vierbuchen, S Ghosh, J Chan… - Nature …, 2020 - nature.com
… understanding of lncRNAs in human immune responses. Here, we identify lncRNA LUCAT1
… To assess lncRNA expression, we performed RNA sequencing in primary human monocyte-…
… To assess lncRNA expression, we performed RNA sequencing in primary human monocyte-…
What sequencing technologies can teach us about innate immunity
M Mohammed Salih, S Carpenter - Immunological reviews, 2022 - Wiley Online Library
… an immune response. In this review, we will discuss the current RNA-sequencing technologies
… and transcripts, such as long non-coding RNAs (lncRNAs), which we will discuss in depth …
… and transcripts, such as long non-coding RNAs (lncRNAs), which we will discuss in depth …
Skin-expressing lncRNAs in inflammatory responses
A Shefler, MT Patrick, R Wasikowski, J Chen… - Frontiers in …, 2022 - frontiersin.org
… few lncRNAs that are express across different cell types in skin, including MALAT1, NEAT1,
and GAS5. While lncRNAs in … With the advent of next generation sequencing technology, our …
and GAS5. While lncRNAs in … With the advent of next generation sequencing technology, our …
Long noncoding RNAs are involved in multiple immunological pathways in response to vaccination
DS de Lima, LE Cardozo… - Proceedings of the …, 2019 - National Acad Sciences
… Moreover, we used an RNA-sequencing (RNA-seq) dataset to identify lncRNAs which were
… reveal the potential roles of lncRNAs in regulating the immune responses to vaccination. …
… reveal the potential roles of lncRNAs in regulating the immune responses to vaccination. …