Whole transcriptome sequencing reveals dexmedetomidine-improves postoperative cognitive dysfunction in rats via modulating lncRNA

F Deng, L Cai, B Zhou, Z Zhou, GH Xu - 3 Biotech, 2020 - Springer
… macrophage inflammatory response, and they found that the abnormally expressed mRNAs
and lncRNAs were primarily involved in the inflammatory and immune response. Another …

Full-length annotation with multistrategy RNA-seq uncovers transcriptional regulation of lncRNAs in cotton

X Zheng, Y Chen, Y Zhou, K Shi, X Hu, D Li… - Plant …, 2021 - academic.oup.com
… development and environmental responses. To build an accurate atlas of lncRNAs in the …
Herein, we found that 48% of lncRNAs contain TE-derived sequences (overlap with TEs by …

Long non-coding RNAs: Fine-tuning the developmental responses in plants

R Datta, S Paul - Journal of Biosciences, 2019 - Springer
… , particularly high-throughput sequencing technology, many transcriptional units with no …
different physiological aspects of lncRNAs in plant development. In plants, lncRNAs are found to …

Long non-coding RNAs as emerging regulators of pathogen response in plants

Y Sharma, A Sharma, Madhu, Shumayla, K Singh… - Non-coding RNA, 2022 - mdpi.com
… In this review, we have mainly focused on the role of lncRNAs in biotic stress response due
to … GmENOD90 from Glycine max was the first identified plant lncRNA using RNA sequencing

Transcriptome sequencing of lncRNA, miRNA, mRNA and interaction network constructing in coronary heart disease

J Liao, J Wang, Y Liu, J Li, L Duan - BMC medical genomics, 2019 - Springer
… immune response, antigen processing and presentation, humoral immune response, Primary
… It is well established that lncRNA can sponge miRNA via miRNA response elements (MREs…

Regulation mechanism of long non-coding RNA in plant response to stress

X Sun, H Zheng, N Sui - Biochemical and biophysical research …, 2018 - Elsevier
… proposed that lncRNAs play important roles in response to … of high-throughput gene
sequencing technology and large-scale … that about 93% of the sequences in the human genome …

A comprehensive overview of lncRNA annotation resources

J Xu, J Bai, X Zhang, Y Lv, Y Gong, L Liu… - Briefings in …, 2017 - academic.oup.com
… in omics are raw biological sequences (ie DNA, RNA, amino acid sequences) which have …
-generation sequencing technology. In addition, extracted features from sequences such as a …

… non-coding RNAs (lncRNAs) of sea cucumber: large-scale prediction, expression profiling, non-coding network construction, and lncRNA-microRNA-gene interaction …

C Mu, R Wang, T Li, Y Li, M Tian, W Jiao, X Huang… - Marine …, 2016 - Springer
… Based on their effects on DNA sequences, lncRNAs can be classified as either cis-lncRNAs
Here, in order to reveal the role of lncRNAs in immune response and tissue regeneration of …

Integrative analyses of transcriptome sequencing identify novel functional lncRNAs in esophageal squamous cell carcinoma

CQ Li, GW Huang, ZY Wu, YJ Xu, XC Li, YJ Xue, Y Zhu… - Oncogenesis, 2017 - nature.com
responses. These findings establish a catalog of novel cancer-associated functional lncRNAs,
which will promote our understanding of lncRNA-mediated regulation in this malignancy. …

Systematic identification and analysis of expression profiles of mRNAs and incrnas in macrophage inflammatory response

L Li, Y Zhang, H Luo, C Huang, S Li, A Liu, Y Jiang - Shock, 2019 - journals.lww.com
response are largely unexplored. In this study, we performed high-throughput sequencing to
identify the profiles of mRNA and lncRNAlncRNA-mRNA network for the immune response