The solution structure and DNA-binding properties of the cold-shock domain of the human Y-box protein YB-1

CPAM Kloks, CAEM Spronk, E Lasonder… - Journal of molecular …, 2002 - Elsevier
… The human Y-box protein 1 (YB-1) is a … the solution structure of the cold-shock domain (CSD)
of YB-1, which is thought to be responsible for nucleic acid binding. It is the first structure

The major mRNP protein YB-1: structural and association properties in solution

SG Guryanov, VV Filimonov, AA Timchenko… - … et Biophysica Acta (BBA …, 2013 - Elsevier
structural properties. In the present work we focused on studying its secondary structure,
rigidity of its tertiary structure, … -CD, DSC, one-dimensional 1 H NMR, SAXS, sedimentation and …

Structural organization of mRNA complexes with major core mRNP protein YB-1

MA Skabkin, OI Kiselyova, KG Chernov… - Nucleic acids …, 2004 - academic.oup.com
… that YB-1 changes its quaternary structure on mRNA depending on the YB-1/mRNA ratio. …
It is not excluded that in solution YB-1 is a spherical particle that is flattened upon interaction …

Crystal structure of a Y-box binding protein 1 (YB-1)–RNA complex reveals key features and residues interacting with RNA

XJ Yang, H Zhu, SR Mu, WJ Wei, X Yuan… - Journal of Biological …, 2019 - ASBMB
… of the YB-1–RNA interactions, we report high-resolution crystal structures of the YB-1 CSD in
… Interestingly, YB-1 CSD forms a homodimer in solution, and we observed that two residues, …

YB-1 is capable of forming extended nanofibrils

OM Selivanova, SG Guryanov, GA Enin… - Biochemistry …, 2010 - Springer
… This paper is the first report that in solution YB 1 can form extended fibrils with a length
amounting to >10 µm. Almost as soon as the ionic strength is increased to 2 M LiCl, …

Lanthanide-induced pseudocontact shifts for solution structure refinements of macromolecules in shells up to 40 Å from the metal ion

M Allegrozzi, I Bertini, MBL Janik, YM Lee… - Journal of the …, 2000 - ACS Publications
… Two more lanthanide-containing Calbindin D 9k derivatives were prepared by titrating the
protein with either a 0.1 M Yb 3+ or Dy 3+ solution. The 1D spectra of the three lanthanide …

YbYb correlations and crystal-field effects in the Kondo insulator YbB12 and its solid solutions

…, NY Shitsevalova, YB Paderno… - Journal of Physics …, 2004 - iopscience.iop.org
… Inelastic neutron spectra have been measured in Yb1−x Lux B12 compounds for four Lu …
of coherence on the Yb sublattice primarily affects the narrow peak structure occurring near 15–…

Structure Induced Yb Valence Changes in the Solid Solution YbxCa1-xC2

P Link, P Glatzel, K Kvashnina, DM Trots… - Inorganic …, 2013 - ACS Publications
… of the mean Yb valence from … structures) by DSC measurements corroborated our results
concerning the close relationship between crystal structure and Yb valence in the solid solution

Formation of amyloid-like fibrils by Y-box binding protein 1 (YB-1) is mediated by its cold shock domain and modulated by disordered terminal domains

SG Guryanov, OM Selivanova, AD Nikulin, GA Enin… - PloS one, 2012 - journals.plos.org
solution and in protein-saturated complexes with mRNA, YB-… of YB-1 to fibril formation, (ii)
the salt effect on formation of YB-1 … of the formed YB-1 fibrils. We found that fibril formation by …

Preparation of (Y, Yb) MnO3/Y2O3/Si (MFIS) structure by chemical solution deposition method

K Suzuki, D Fu, K Nishizawa, T Miki… - Japanese journal of …, 2003 - iopscience.iop.org
solution with atomic ratios of (Y+Yb):Mn=1:1. The concentrations of the solutions were adjusted
to 0.2mol/L for (Y,Yb)… The solutions were then reacted at a reflux temperature of 124 C for …