Potentials of mean force with ab initio mixed Hamiltonian models of solvation
M Dupuis, GK Schenter, BG Garrett, EE Arcia - Journal of Molecular …, 2003 - Elsevier
… are most often calculated via an ad hoc classical representation of the solute with a
Lennard–Jones (LJ) potential function similar to the one used for solvent–solvent interactions [27], [28…
Lennard–Jones (LJ) potential function similar to the one used for solvent–solvent interactions [27], [28…
Modeling aqueous solvation with semi-explicit assembly
CJ Fennell, CW Kehoe, KA Dill - Proceedings of the …, 2011 - National Acad Sciences
… Spheres span a range of different sizes and Lennard–Jones parameters (6ϵ values and 6
σ values) and a range of 11 different partial charges. In total, we do precomputations on 396 …
σ values) and a range of 11 different partial charges. In total, we do precomputations on 396 …
Mobility and solvation of ions in channels
RM Lynden‐Bell, JC Rasaiah - The Journal of Chemical Physics, 1996 - pubs.aip.org
… modeling, … -Jones spheres with parameters identical to some of the real ions. The interactions
of the ions with the water molecules are also due to charges and Lennard-Jones potentials…
of the ions with the water molecules are also due to charges and Lennard-Jones potentials…
Variational approach for nonpolar solvation analysis
… solvation models ranging from simple phenomenological modifications of Coulomb's law,
implicit solvent models … assume that the Lennard-Jones potential is a constant when sampling …
implicit solvent models … assume that the Lennard-Jones potential is a constant when sampling …
New approach to free energy of solvation applying continuum models to molecular dynamics simulation
PFB Gonçalves, H Stassen - Journal of computational chemistry, 2002 - Wiley Online Library
… Furthermore, comparing the cavity, electrostatic, and van der Waals contributions to ΔG
solv with quantum-mechanical results computed by continuum models, our MD solvation free …
solv with quantum-mechanical results computed by continuum models, our MD solvation free …
Physics of solvation
… with the host fluid atoms with a Lennard-Jones potential. We further assume that the fluid's
… We have explored several models in order to address the question of solvation of impurities …
… We have explored several models in order to address the question of solvation of impurities …
Predicting solvation free energies in non-polar solvents using classical density functional theory based on the PC-SAFT equation of state
J Eller, T Matzerath, T van Westen… - The Journal of Chemical …, 2021 - pubs.aip.org
… -field models describe the solvent only implicitly as a polarizable medium of dielectric constant
ɛ. The solvation … Lennard-Jones potentials of the carbon interaction sites superimpose. …
ɛ. The solvation … Lennard-Jones potentials of the carbon interaction sites superimpose. …
The solvation of ions in acetonitrile and acetone: A molecular Ornstein–Zernike study
J Richardi, PH Fries, H Krienke - The Journal of chemical physics, 1998 - pubs.aip.org
… help of more realistic models of the solvent molecules.These … To study the effects of the
Lennard-Jones potentials involving … Lennard-Jones potential to a Buckingham potential obtained …
Lennard-Jones potentials involving … Lennard-Jones potential to a Buckingham potential obtained …
Molecular dynamics simulations of liquid, interface, and ionic solvation of polarizable carbon tetrachloride
TM Chang, KA Peterson, LX Dang - The Journal of chemical physics, 1995 - pubs.aip.org
… solvation and ion transport occurring in these media. The accuracy of these simulations
depends critically on the potential models … and Lennard-Jones potential parameters associated …
depends critically on the potential models … and Lennard-Jones potential parameters associated …
From hydrophobic to hydrophilic behaviour: A simulation study of solvation entropy and free energy of simple solutes
RM Lynden-Bell, JC Rasaiah - The Journal of chemical physics, 1997 - pubs.aip.org
… SPC/E water with charged Lennard-Jones spheres as solutes does not describe all … potentials
and small system sizes. The essential physics of solvation must be present in these models…
and small system sizes. The essential physics of solvation must be present in these models…