Potentials of mean force with ab initio mixed Hamiltonian models of solvation

M Dupuis, GK Schenter, BG Garrett, EE Arcia - Journal of Molecular …, 2003 - Elsevier
… are most often calculated via an ad hoc classical representation of the solute with a
Lennard–Jones (LJ) potential function similar to the one used for solvent–solvent interactions [27], [28…

Modeling aqueous solvation with semi-explicit assembly

CJ Fennell, CW Kehoe, KA Dill - Proceedings of the …, 2011 - National Acad Sciences
… Spheres span a range of different sizes and Lennard–Jones parameters (6ϵ values and 6
σ values) and a range of 11 different partial charges. In total, we do precomputations on 396 …

Mobility and solvation of ions in channels

RM Lynden‐Bell, JC Rasaiah - The Journal of Chemical Physics, 1996 - pubs.aip.org
modeling, … -Jones spheres with parameters identical to some of the real ions. The interactions
of the ions with the water molecules are also due to charges and Lennard-Jones potentials

Variational approach for nonpolar solvation analysis

Z Chen, S Zhao, J Chun, DG Thomas… - The Journal of …, 2012 - pubs.aip.org
solvation models ranging from simple phenomenological modifications of Coulomb's law,
implicit solvent models … assume that the Lennard-Jones potential is a constant when sampling …

New approach to free energy of solvation applying continuum models to molecular dynamics simulation

PFB Gonçalves, H Stassen - Journal of computational chemistry, 2002 - Wiley Online Library
… Furthermore, comparing the cavity, electrostatic, and van der Waals contributions to ΔG
solv with quantum-mechanical results computed by continuum models, our MD solvation free …

Physics of solvation

F Ancilotto, PB Lerner, MW Cole - Journal of low temperature physics, 1995 - Springer
… with the host fluid atoms with a Lennard-Jones potential. We further assume that the fluid's
… We have explored several models in order to address the question of solvation of impurities …

Predicting solvation free energies in non-polar solvents using classical density functional theory based on the PC-SAFT equation of state

J Eller, T Matzerath, T van Westen… - The Journal of Chemical …, 2021 - pubs.aip.org
… -field models describe the solvent only implicitly as a polarizable medium of dielectric constant
ɛ. The solvation … Lennard-Jones potentials of the carbon interaction sites superimpose. …

The solvation of ions in acetonitrile and acetone: A molecular Ornstein–Zernike study

J Richardi, PH Fries, H Krienke - The Journal of chemical physics, 1998 - pubs.aip.org
… help of more realistic models of the solvent molecules.These … To study the effects of the
Lennard-Jones potentials involving … Lennard-Jones potential to a Buckingham potential obtained …

Molecular dynamics simulations of liquid, interface, and ionic solvation of polarizable carbon tetrachloride

TM Chang, KA Peterson, LX Dang - The Journal of chemical physics, 1995 - pubs.aip.org
solvation and ion transport occurring in these media. The accuracy of these simulations
depends critically on the potential models … and Lennard-Jones potential parameters associated …

From hydrophobic to hydrophilic behaviour: A simulation study of solvation entropy and free energy of simple solutes

RM Lynden-Bell, JC Rasaiah - The Journal of chemical physics, 1997 - pubs.aip.org
… SPC/E water with charged Lennard-Jones spheres as solutes does not describe all … potentials
and small system sizes. The essential physics of solvation must be present in these models