Analysis of transcripts and splice isoforms in red clover (Trifolium pratense L.) by single-molecule long-read sequencing

Y Chao, J Yuan, S Li, S Jia, L Han, L Xu - BMC plant biology, 2018 - Springer
… In this study, the red clover transcriptome was sequenced using single-molecule long-read …
splice isoforms, and 29,730 novel isoforms from known genes and 2194 novel isoforms from …

Unveiling the Complexity of Red Clover (Trifolium pratense L.) Transcriptome and Transcriptional Regulation of Isoflavonoid Biosynthesis Using Integrated Long- and …

K Shi, X Liu, X Pan, J Liu, W Gong, P Gong… - International Journal of …, 2021 - mdpi.com
… in isoflavonoid biosynthesis in red clover. Overall, we obtained 50,922 isoforms, including
… novel transcripts, AS events, associated splice isoforms, fusion transcripts, and long non-…

Genome-wide atlas of alternative polyadenylation in the forage legume red clover

M Chakrabarti, RD Dinkins, AG Hunt - Scientific Reports, 2018 - nature.com
… transcription initiation and alternative splicing, APA can … For instance, in human mRNA
isoforms in blood, and testis … -encoding genes produce multiple isoforms, such as CstF64 …

Expression and variation of the genes involved in rhizobium nodulation in red clover

RD Dinkins, JA Hancock, DM Bickhart, ML Sullivan… - Plants, 2022 - mdpi.com
… putative protein isoforms and has the highest similarity to the red clover Tp3g123918940. …
the alternative spliced isoform suggesting that Tp7g123897430 gene is the red clover SYP132 …

Identification of Single Nucleotide Polymorphism in Red Clover (Trifolium pratense L.) Using Targeted Genomic Amplicon Sequencing and RNA-seq

W Li, H Riday, C Riehle, A Edwards… - Frontiers in Plant …, 2019 - frontiersin.org
… Plant materials used in this study were from red clover C328WS and Kenland red clover.
C328WS is currently stored and maintained at the US Dairy Forage Research Center. Kenland …

Isoflavone levels, nodulation and gene expression profiles of a CRISPR/Cas9 deletion mutant in the isoflavone synthase gene of red clover

RD Dinkins, J Hancock, BL Coe, JB May… - Plant Cell Reports, 2021 - Springer
… While the major isoflavones found in soybean, genistein and daidzein, are also found at
varying levels in red clover, it appears that in red clover these isoflavones are further catalyzed …

Transcriptome analysis of leaf senescence in red clover (Trifolium pratense L.)

Y Chao, L Xie, J Yuan, T Guo, Y Li, F Liu… - Physiology and Molecular …, 2018 - Springer
… in red clover is very sparse. In this study, to better understand leaf senescence in red clover,
… Transcriptome analysis of mature and senescent leaves in red clover provides a large …

Revealing the full-length transcriptome of caucasian clover rhizome development

X Yin, K Yi, Y Zhao, Y Hu, X Li, T He, J Liu, G Cui - BMC Plant Biology, 2020 - Springer
… than 42,280 different splicing isoforms and a large number of alternative splicing (AS) … clover
and red clover, the rhizome is one of the most distinctive characteristics of caucasian clover […

Drought stress tolerance of red and white clover–comparative analysis of some chaperonins and dehydrins

I Vaseva, Y Akiscan, K Demirevska, I Anders… - Scientia horticulturae, 2011 - Elsevier
… in red clover and the medium leafed white clover cultivar “Haifa”. Immunoblot and RT-PCR
showed that the small leafed white clover … subjected to alternative splicing under drought and …

Irilone, a red clover isoflavone, combined with progesterone enhances PR signaling through the estrogen and glucocorticoid receptors

JR Austin, K Li, R Rivera Rodríguez… - Journal of natural …, 2021 - ACS Publications
red clover) is a popular botanical supplement used for women’s health. Irilone isolated from
red clover … (1) PR consists of two isoforms that are splice variants of each other, PR-B and PR…