Distinct transcriptomic signature of mRNA and microRNA in ulcerative colitis and irritable bowel syndrome

H Luo, J Dai, C Liu, Y Lee, H Lv, J Qian - medRxiv, 2021 - medrxiv.org
… -expression module, we identified 18 DEG-mRNAs that were … Psychological stress was only
correlated with 5 DEG-mRNAs … cellular metabolism, immunity and stress response (40). Our …

Regulation of the transcriptome by ER stress: non-canonical mechanisms and physiological consequences

AM Arensdorf, D Diedrichs, DT Rutkowski - Frontiers in genetics, 2013 - frontiersin.org
… in yeast, so also a mammalian ER stress response element (ERSE) in the promoters of Bip
… signaling modules, the global contribution of these pathways to mRNA regulation during ER …

An updated gene atlas for maize reveals organ‐specific and stress‐induced genes

GM Hoopes, JP Hamilton, JC Wood… - The Plant …, 2019 - Wiley Online Library
… abundances for replicated mRNA-sequencing datasets from … to improve our understanding
of stress responses in B73 and … Among the modules enriched for stress DE genes, Module 2 …

Processing bodies require RNA for assembly and contain nontranslating mRNAs

D Teixeira, U Sheth, MA Valencia-Sanchez… - Rna, 2005 - rnajournal.cshlp.org
mRNAs and function during cellular responses to stress. First, in … -bodies vary in response
to glucose deprivation, osmotic stress, … were undergoing a partial stress response (see below). …

Identification of inflammatory gene modules based on variations of human endothelial cell responses to oxidized lipids

PS Gargalovic, M Imura, B Zhang… - Proceedings of the …, 2006 - National Acad Sciences
… Therefore, we profiled global mRNA expression levels in HAEC cultures derived from 12 …
module contained HMOX1 and other genes involved in the response to oxidative stress

Protor-2 interacts with tristetraprolin to regulate mRNA stability during stress

B Holmes, N Artinian, L Anderson, J Martin, J Masri… - Cellular signalling, 2012 - Elsevier
stress granules or processing bodies during stress. ► We conclude that Protor-2 regulates
tristetraprolin mediated mRNA … that during other cellular stress responses such as heat shock, …

Genome‐wide discovery of natural variation in pre‐mRNA splicing and prioritising causal alternative splicing to salt stress response in rice

H Yu, Q Du, M Campbell, B Yu, H Walia… - New …, 2021 - Wiley Online Library
… VaSP makes the identification of pre-mRNA splicing straightforward after … -mRNA splicing
associated with a phenotype of interest, VaSP implemented an additional functional module to …

Nonsense-mediated mRNA decay in development, stress and cancer

R Fernandes, G Nogueira, PJ da Costa, F Pinto… - The mRNA Metabolism …, 2019 - Springer
… of NMD during mammalian development and cellular stress responses, and how its time-…
physical interactions, and by regulatory modules that control the condition specific activation of …

Genome-wide profiling of the potential regulatory network of lncRNA and mRNA in Melilotus albus under salt stress

X Zong, S Wang, Y Han, Q Zhao, P Xu, Q Yan… - Environmental and …, 2021 - Elsevier
… albus response to salt stress. Many salt stress-related lncRNAs and mRNAs were identified
… albus under salt stress and provided candidate lncRNAs for improving other leguminosae …

The miRNA-mRNA Regulatory Modules of Pinus massoniana Lamb. in Response to Drought Stress

X Chen, H Chen, T Shen, Q Luo, M Xu… - International Journal of …, 2023 - mdpi.com
… To uncover candidate microRNAs, their expression profiles, and microRNA-mRNA … , and
Early Responsive to Dehydration Stress may play critical roles in drought response. This study …