[HTML][HTML] Deep learning-based prediction of molecular cancer biomarkers from tissue slides: A new tool for precision oncology

SH Lee, HJ Jang - Clinical and Molecular Hepatology, 2022 - ncbi.nlm.nih.gov
… We also tried to predict mutations in gastric cancer (GC) tissue slides [21]. Similar to the
study for the CRC, we separately trained the classifiers for frozen and FFPE tissues and …

A decade of tissue microarrays: progress in the discovery and validation of cancer biomarkers

RL Camp, V Neumeister, DL Rimm - Journal of clinical oncology, 2008 - ascopubs.org
cancer biomarker studies performed. The growing popularity of TMA-based studies attests to
their benefits in the discovery and validation of new biomarkers… in cancer treatment, the use …

[HTML][HTML] Quantitative measurement of cancer tissue biomarkers in the lab and in the clinic

DE Carvajal-Hausdorf, KA Schalper… - Laboratory …, 2015 - Elsevier
Biomarkers have been historically considered analytes … in tissues can have more value than
circulating biomarkers as they are … new avenues for the use of RNAs as cancer biomarkers. …

Tissue microarray sampling strategy for prostate cancer biomarker analysis

MA Rubin, R Dunn, M Strawderman… - The American journal of …, 2002 - journals.lww.com
… This prostate cancer outcomes array should be useful in evaluating other putative prostate
cancer biomarkers. High-density tissue microarrays (TMA) are useful for rapid analysis of …

Direct cancer tissue proteomics: a method to identify candidate cancer biomarkers from formalin-fixed paraffin-embedded archival tissues

SI Hwang, J Thumar, DH Lundgren, K Rezaul, V Mayya… - Oncogene, 2007 - nature.com
… that a commonly used prostate cancer biomarker (PSA) can be detected … biomarkers; every
potential biomarker requires a thorough validation step using a large number of cancer tissue

Examination of oral cancer biomarkers by tissue microarray analysis

P Choi, CD Jordan, E Mendez, J Houck… - … –Head & Neck …, 2008 - jamanetwork.com
… We selected 6 potential biomarkers of OSCC for the present validation study by examining
DNA microarray data from our laboratory as well as that published in the literature. The …

[HTML][HTML] Effects of tissue decalcification on the quantification of breast cancer biomarkers by digital image analysis

A Gertych, S Mohan, S Maclary, S Mohanty… - Diagnostic …, 2014 - Springer
… Thus in addition to the breast cancer biomarker used in this study, each IHC marker needs
be evaluated individually tested for its sensitivity to various pre-analytical conditions that …

Clinical validation of breast cancer biomarkers using tissue microarray technology

I Quraishi, M Rishi, M Feldman… - Applied …, 2007 - journals.lww.com
… The results of this study indicate that one can identify a potential biomarker from a DNA
microarray experiment but this technology alone cannot be totally reliable in this regard. Mainly …

Common cancer biomarkers

CF Basil, Y Zhao, K Zavaglia, P Jin, MC Panelli… - Cancer research, 2006 - AACR
… Indeed, several of the currently used cancer biomarkers stem as differentiation markers
from the tissue from which specific cancers originate, such as tyrosinase in melanoma (4), …

[HTML][HTML] Deep learning in cancer pathology: a new generation of clinical biomarkers

A Echle, NT Rindtorff, TJ Brinker, T Luedde… - … journal of cancer, 2021 - nature.com
… of invasive cancer from the … biomarker used for patient stratification in prostate cancer.
Gleason grading is usually performed manually by expert pathologists based on H&E tissue slides