[HTML][HTML] Genetic Architecture and Genomic Prediction of Cooking Time in Common Bean (Phaseolus vulgaris L.)

S Diaz, D Ariza-Suarez, R Ramdeen… - Frontiers in Plant …, 2021 - frontiersin.org
… A cross-prediction scenario was tested between and within populations and traits, using
the RKHS model described above. Unlike the single-trait assessment of genomic prediction, …

Complex-trait prediction in the era of big data

G de Los Campos, AI Vazquez, S Hsu, L Lello - Trends in Genetics, 2018 - cell.com
… of Big Genomic Data will enable unprecedented improvements in complex-trait prediction; …
and discuss challenges and opportunities that Big Data will bring to complex-trait prediction. …

[HTML][HTML] Resource allocation optimization with multi-trait genomic prediction for bread wheat (Triticum aestivum L.) baking quality

B Lado, D Vázquez, M Quincke, P Silva… - Theoretical and Applied …, 2018 - Springer
… ST-CV1: single-trait prediction cross-validation 1 where a trait is predicted at a time; we used
60% of individuals as the training population (phenotyped and genotyped, green) and 40% …

The impact of genetic architecture on genome-wide evaluation methods

HD Daetwyler, R Pong-Wong, B Villanueva… - Genetics, 2010 - academic.oup.com
Genome-wide evaluation combines statistical methods with genomic data to predict genetic
values for complex traits. … aid our understanding of quantitative trait genetic architecture. …

Genomic prediction of agronomic traits in wheat using different models and cross-validation designs

TA Haile, S Walkowiak, A N'Diaye, JM Clarke… - Theoretical and Applied …, 2021 - Springer
… for within-population genomic predictions in the presence of few quantitative trait loci (QTL) …
prediction when the same QTL underlie traits in both populations. The accuracy of prediction

[HTML][HTML] Application of high-dimensional feature selection: evaluation for genomic prediction in man

ML Bermingham, R Pong-Wong, A Spiliopoulou… - Scientific reports, 2015 - nature.com
… , a number of recent genomic prediction studies from animal … standard in GWAS 10 , genomic
prediction studies in admixed … for all traits was marginally lower when predicting within the …

[HTML][HTML] MegaLMM: mega-scale linear mixed models for genomic predictions with thousands of traits

DE Runcie, J Qu, H Cheng, L Crawford - Genome biology, 2021 - Springer
… of genomic prediction in plant and animal breeding, as well as human genetics. However, the
statistical foundation of multi-trait genomic prediction is … than a handful of traits. We present …

Genomic selection: genome-wide prediction in plant improvement

ZA Desta, R Ortiz - Trends in plant science, 2014 - cell.com
… Whole-genome prediction models estimate all marker effects in all loci and capture small …
Here, we review several genomic selection (GS) models with respect to both the prediction

The utility of genomic prediction models in evolutionary genetics

SE McGaugh, AJ Lorenz… - Proceedings of the …, 2021 - royalsocietypublishing.org
… more about the genetic architecture of traits, the genetic value … genomic prediction and
provide an overview of the methodology. We highlight opportunities to apply genomic prediction

[HTML][HTML] Multi-trait multi-environment genomic prediction for end-use quality traits in winter wheat

KS Sandhu, SS Patil, M Aoun, AH Carter - Frontiers in Genetics, 2022 - frontiersin.org
… -trait–based GS models to enhance prediction accuracy by using information from previously
phenotyped traits. … multi-trait–based GS models to predict seven end-use quality traits in soft …