[HTML][HTML] The omnigenic model and polygenic prediction of complex traits
I Mathieson - The American Journal of Human Genetics, 2021 - cell.com
… We have learned an enormous amount about the genetic architecture of complex traits …
these data and to develop models of complex trait architecture, like the omnigenic model, that are …
these data and to develop models of complex trait architecture, like the omnigenic model, that are …
Genomic Prediction Informed by Biological Processes Expands Our Understanding of the Genetic Architecture Underlying Free Amino Acid Traits in Dry Arabidopsis …
… , with only a few candidate genes and quantitative trait loci identified to date. Improved
knowledge … Toward this goal, we used genomic prediction to identify biological processes that are …
knowledge … Toward this goal, we used genomic prediction to identify biological processes that are …
Genomic prediction in contrast to a genome-wide association study in explaining heritable variation of complex growth traits in breeding populations of Eucalyptus
BSF Müller, LG Neves, JE de Almeida Filho… - BMC genomics, 2017 - Springer
… In this study, we report the development of genomic prediction models for growth traits in
two breeding populations of E. benthamii (n =505) and E. pellita (n =732) using SNP data …
two breeding populations of E. benthamii (n =505) and E. pellita (n =732) using SNP data …
Evaluating sequence-based genomic prediction with an efficient new simulator
… The first factor is the genetic architecture of the trait, together with the demographic history of
… derive prediction equations plays a role as well. The genetic determinism of complex traits …
… derive prediction equations plays a role as well. The genetic determinism of complex traits …
Genome-wide association studies and whole-genome prediction reveal the genetic architecture of KRN in maize
Y An, L Chen, YX Li, C Li, Y Shi, D Zhang, Y Li… - BMC Plant …, 2020 - Springer
… in the above GWAS methods as fixed effects in the rrBLUP model is a powerful tool for
KRN prediction, which was a trait-specific consideration in the given population in this study. …
KRN prediction, which was a trait-specific consideration in the given population in this study. …
Genome‐wide mapping and prediction of plant architecture in a sorghum nested association mapping population
… , we cross-validated genomic BLUPs of eight traits using two … contrasted genomic prediction
accuracy for vegetative architecture traits with accuracies for inflorescence architecture traits. …
accuracy for vegetative architecture traits with accuracies for inflorescence architecture traits. …
Genetic architecture of maize kernel row number and whole genome prediction
L Liu, Y Du, D Huo, M Wang, X Shen, B Yue… - Theoretical and Applied …, 2015 - Springer
… Genome-wide genotyping also permits the improvement of the trait by genomic selection
or whole-genome prediction (WGP), similar to that achieved in cattle breeding. This approach …
or whole-genome prediction (WGP), similar to that achieved in cattle breeding. This approach …
Genetic architecture and genomic prediction of plant height-related traits in chrysanthemum
X Zhang, J Su, F Jia, Y He, Y Liao, Z Wang… - Horticulture …, 2024 - academic.oup.com
Plant height (PH) is a crucial trait determining plant architecture in chrysanthemum. To better
understand the genetic basis of PH, we investigated the variations of PH, internode number …
understand the genetic basis of PH, we investigated the variations of PH, internode number …
Deep learning versus parametric and ensemble methods for genomic prediction of complex phenotypes
R Abdollahi-Arpanahi, D Gianola… - Genetics Selection …, 2020 - Springer
… prediction machines depends on the genetic architecture … genomic prediction of complex
traits and DL does not appear to be a panacea for genome-enabled prediction of complex traits. …
traits and DL does not appear to be a panacea for genome-enabled prediction of complex traits. …
Whole-genome mapping of quantitative trait loci and accuracy of genomic predictions for resistance to columnaris disease in two rainbow trout breeding populations
RMO Silva, JP Evenhuis, RL Vallejo, G Gao… - Genetics Selection …, 2019 - Springer
… provided a prediction accuracy close to zero, due to the binary nature of the trait. Using … the
complete data as benchmark improved prediction accuracy of genomic models by about 40% …
complete data as benchmark improved prediction accuracy of genomic models by about 40% …