… genome‐wide association study (XP‐GWAS): a method for identifying trait‐associated variants by sequencing pools of individuals selected from a diversity panel
… We performed XP-GWAS for the quantitative trait kernel row number (KRN) of maize (Zea
mays) using a diversity panel of approximately 7000 accessions. This trait was selected to …
mays) using a diversity panel of approximately 7000 accessions. This trait was selected to …
Genetic diversity and trait genomic prediction in a pea diversity panel
J Burstin, P Salloignon, M Chabert-Martinello… - BMC genomics, 2015 - Springer
… exhibit high heritabilities due to few loci controlling the trait, the genetic architecture of this
trait may nonetheless be complex due to many variants clustered at these loci. To the contrary, …
trait may nonetheless be complex due to many variants clustered at these loci. To the contrary, …
Genetic diversity turns a new PAGE in our understanding of complex traits
… trait-variant pairs, of which 1,444 replicated at a by-trait Bonferroni adjusted significance level.
In addition, we found 27 novel trait-variant pairs … Using PAGE and Global Reference Panel …
In addition, we found 27 novel trait-variant pairs … Using PAGE and Global Reference Panel …
Sorghum Association Panel whole‐genome sequencing establishes cornerstone resource for dissecting genomic diversity
… data available for this crucial diversity panel, we sequenced the … the genetic architecture of
traits and propelling genomics-… pan-genomes with variant data from diversity panels such as …
traits and propelling genomics-… pan-genomes with variant data from diversity panels such as …
Genome-wide association study of yield components and fibre quality traits in a cotton germplasm diversity panel
W Gapare, W Conaty, QH Zhu, S Liu, W Stiller… - Euphytica, 2017 - Springer
… variant has no effect (eg, A) on the trait and the other has an effect (eg, B). A homozygous
individual with two copies of the allele (BB) will express twice the value of the effect (hence the …
individual with two copies of the allele (BB) will express twice the value of the effect (hence the …
Genetic analyses of diverse populations improves discovery for complex traits
… In addition, we found 27 novel trait–variant pairs and 38 … trait-associated variants exhibit
differential frequencies across populations, further illustrating a need for the inclusion of diverse …
differential frequencies across populations, further illustrating a need for the inclusion of diverse …
Insights from complex trait fine-mapping across diverse populations
… in diverse populations enables novel insights into the biology of complex traits by pinpointing
high-confidence causal variants … panels represent r 2 values to the lead variant. In the PIP …
high-confidence causal variants … panels represent r 2 values to the lead variant. In the PIP …
Genome‐wide association study of multiple yield traits in a diversity panel of polyploid sugarcane (Saccharum spp.)
… traits in a sugarcane diversity panel consisting of 308 accessions primarily selected from the
World Collection of Sugarcane and Related … a large number of sequence variants. Genome-…
World Collection of Sugarcane and Related … a large number of sequence variants. Genome-…
[HTML][HTML] Resequencing of 672 native rice accessions to explore genetic diversity and trait associations in Vietnam
… the range of rice varieties grown in the diverse ecosystems found throughout Vietnam. We
… to form a native diversity panel with 672 accessions. We analysed this diversity panel of 672 …
… to form a native diversity panel with 672 accessions. We analysed this diversity panel of 672 …
A genome-wide association study reveals genes associated with Fusarium ear rot resistance in a maize core diversity panel
CT Zila, LF Samayoa, R Santiago… - G3: Genes …, 2013 - academic.oup.com
… characteristics. We report the results of a genome-wide association study to detect … variants
associated with increased resistance to Fusarium ear rot in a maize core diversity panel of …
associated with increased resistance to Fusarium ear rot in a maize core diversity panel of …
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