CellCall: integrating paired ligand–receptor and transcription factor activities for cellcell communication

Y Zhang, T Liu, X Hu, M Wang, J Wang… - Nucleic acids …, 2021 - academic.oup.com
… at the single-cell level (16,22). More importantly, cell-cell communication includes not only
… culminating in altered activity of downstream transcription factors (TFs) and gene regulatory …

The transcription factor PU. 1 is a critical regulator of cellular communication in the immune system

SA Turkistany, RP DeKoter - Archivum immunologiae et therapiae …, 2011 - Springer
… This analysis reveals that PU.1 plays a central role in cellular communication within the
immune system. We highlighted three functional pathways regulated by PU.1: (1) antibodies and …

Regulation of Cell-to-Cell Communication and Cell Wall Integrity by a Network of MAP Kinase Pathways and Transcription Factors in Neurospora crassa

MS Fischer, VW Wu, JE Lee, RC O'Malley, NL Glass - Genetics, 2018 - academic.oup.com
… many genes required for communication, cell fusion, growth, … , we misexpressed each
transcription factor in each upstream … cell integrity and mediates communication and cell fusion. …

Cellcell communication in yeast using auxin biosynthesis and auxin responsive CRISPR transcription factors

A Khakhar, NJ Bolten, J Nemhauser… - ACS synthetic …, 2016 - ACS Publications
… to build synthetic cellular communication systems in eukaryotes due to a … cell-to-cell
communication system in Saccharomyces cerevisiae (yeast) based on CRISPR transcription factors

Transcription factor-mediated cell-to-cell signalling in plants

X Han, D Kumar, H Chen, S Wu… - Journal of experimental …, 2014 - academic.oup.com
cell-to-cell communication network is composed of diverse intercellular signalling molecules,
including transcription factors… loop includes a mobile transcription factor and a peptide …

Ligands, receptors, and transcription factors that mediate inter-cellular and intra-cellular communication during ovarian follicle development

BP Bernabé, T Woodruff, LJ Broadbelt, LD Shea - Reproductive Sciences, 2020 - Springer
… to the somatic cells through the oocyte-secreted growth factor Gdf9, while … factor Ntn3 to the
oocyte receptor Neo1. Additionally, we identified several of the likely transcription factors that …

CellCallEXT: analysis of ligand–receptor and transcription factor activities in cellcell communication of tumor immune microenvironment

S Gao, X Feng, Z Wu, S Kajigaya, NS Young - Cancers, 2022 - mdpi.com
… to analyze cellcell communication based on transcription factor (TF) activities calculated by
cell-type … to investigate how disease alters cellcell communication. Furthermore, Reactome …

[PDF][PDF] Protein-protein communication within the transcription apparatus

A Ishihama - Journal of bacteriology, 1993 - Am Soc Microbiol
… require additional transcription factors for transcription initiation (1, 16… RNA polymerase and
transcription factors involves direct … working with specific transcription factors from E. coli, the …

[PDF][PDF] Chemical molecules that regulate transcription and facilitate cell-to-cell communication

A Wuster, MM Babu - Wiley Encyclopedia of Chemical Biology, 2008 - mrc-lmb.cam.ac.uk
… is the best charac4 terized bacterial cell4to4cell communication system. AHLs are often …
LuxR4like response regulators are sen4 sors and transcription factors at the same time (9), …

Regulatory enhancer–core-promoter communication via transcription factors and cofactors

MA Zabidi, A Stark - Trends in Genetics, 2016 - cell.com
… enhancers that recruit transcription factors and cofactors to activate transcription from target
… , regulatory communication between enhancers and core promoters, and the protein factors