… Although DNA methylation has long been thought to repress TF binding, a more recent …
inhibit DNA methylation. Here, we review the possible scenarios by which DNA methylation and …

… also interact with methylated DNA. The … methylation-dependent transcription factor–DNA
interactions are important stepping stones towards a mechanistic understanding of methylation-…

… Because DNA methylation is reversible, there is … by DNA-binding transcription factors. We
discuss several models that, by incorporating sequence motifs, CpG density, and methylation …

… Because our goal was to identify DNA methylation-dependent binding activity, we developed
a competition assay on a protein microarray to identify TFs that prefer DNA motifs carrying …

… , DNA methylation regulates gene expression by repressing promoter activity. The repressive
effects of DNA methylation on the … Citation 12 DNA methylation can prevent transcriptional …

… In the current review, we will focus our discussion on the role of transcription factors and
signaling pathways in regulating DNA methylation profiles, and their changes in response to …

… of other regulatory factors. Here we investigate the causal relationship between genomewide
DNA methylation and TF occupancy using the model TF CCCTC-binding factor (zinc finger …

… sequence for DNA methylation of Dnmt3a is increased in presence of c-myc. By … transcription
factor array spotted with 103 transcription factors, we next identified 79 transcription factors …

… Ligands To quantitatively assess the effects of DNA methylation on TF binding, we
developed a method in which a methylated library (Lib-M) and an unmethylated library (Lib-U) …

… cytosine bases leads to the inaccessibility of DNA regulatory elements to their transcription
factors by a number of mechanisms. Our understanding of DNA methylation has advanced …